RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA879314" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA879314 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17436071 17436071 PRJNA879314_P_NODE_6514_length_250_cov_0.881356_g6464_i0 PRJNA879314 6514 250 0.881356 2.20339 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 162 6.089999999999999e-46   NR MBR4330537.1 2053586 g6464 i0 98.8 0.996 83 1 99.6 0 2 250 296 378 MBR4330537.1 TMEM43 family protein [Candidatus Rifleibacteriota bacterium] diamond 249 162 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
29202828 29202828 PRJNA879314_P_NODE_9509_length_245_cov_0.906977_g9459_i0 PRJNA879314 9509 245 0.906977 2.22209365 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 156 1.5499999999999996e-43   NR MBQ2591798.1 2053586 g9459 i0 96.3 1.98367346938776 81 3 99.2 0 244 2 319 399 MBQ2591798.1 arginine--tRNA ligase [Candidatus Rifleibacteriota bacterium] diamond 486 156 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
29518351 29518351 PRJNA879314_P_NODE_3350_length_277_cov_1.514706_g3300_i0 PRJNA879314 3350 277 1.514706 4.19573562 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 111 1.79e-27   NR MBP5470121.1 2053586 g3300 i0 100 0.595667870036101 55 0 59.6 0 166 2 1 55 MBP5470121.1 ATP-binding protein [Candidatus Rifleibacteriota bacterium] diamond 165 111 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32331945 32331945 PRJNA879314_P_NODE_8539_length_246_cov_0.901734_g8489_i0 PRJNA879314 8539 246 0.901734 2.21826564 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 139 3.27e-38   NR HNW12206.1 3022866 g8489 i0 100 0.829268292682927 68 0 82.9 0 205 2 1 68 HNW12206.1 tetratricopeptide repeat protein [Candidatus Rifleibacterium sp.] diamond 204 139 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;