RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879314" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA879314 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28634574 28634574 PRJNA879314_P_NODE_11067_length_242_cov_0.923077_g11017_i0 PRJNA879314 11067 242 0.923077 2.23384634 Candidatus Hydrogenedentes bacterium ADurb.Bin179 1852849 Bacteria Bacteria 137 1.08e-36   NR OQB38170.1 1852849 g11017 i0 77.5 1.98347107438017 80 18 99.2 0 3 242 259 338 OQB38170.1 MAG: D-threonine aldolase [Candidatus Hydrogenedentes bacterium ADurb.Bin179] diamond 480 137 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium ADurb.Bin179
28886839 28886839 PRJNA879314_P_NODE_8008_length_247_cov_0.896552_g7958_i0 PRJNA879314 8008 247 0.896552 2.21448344 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 139 2.91e-36   NR HPO85028.1 2030809 g7958 i0 78 0.995951417004049 82 18 99.6 0 1 246 212 293 HPO85028.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 246 139 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;