RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA879314" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA879314 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28981881 28981881 PRJNA879314_P_NODE_5708_length_251_cov_0.876404_g5658_i0 PRJNA879314 5708 251 0.876404 2.19977404 Conexivisphaerales archaeon 2910431 Archaea Archaea 51.6 1.22e-5   NR HVP24125.1 2910431 g5658 i0 39.7 0.872509960159363 73 40 87.3 2 224 6 33 101 HVP24125.1 hypothetical protein [Conexivisphaerales archaeon] diamond 219 51.6 1 Archaea   Thermoproteati Nitrososphaerota Conexivisphaeria Conexivisphaerales     Conexivisphaerales archaeon
29234337 29234337 PRJNA879314_P_NODE_649_length_523_cov_1.720000_g599_i0 PRJNA879314 649 523 1.72 8.9956 Candidatus Bathycorpusculum acidaminoxidans 3139624 Archaea Archaea 46.6 0.00557   NR MCL2291865.1 3139624 g599 i0 36 0.510516252390057 89 44 47.6 2 505 257 14 95 MCL2291865.1 hypothetical protein [Candidatus Bathycorpusculum acidaminoxidans] diamond 267 46.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia Candidatus Bathyarchaeales Candidatus Bathycorpusculaceae Candidatus Bathycorpusculum Candidatus Bathycorpusculum acidaminoxidans
31572466 31572466 PRJNA879314_P_NODE_5516_length_251_cov_0.876404_g5466_i0 PRJNA879314 5516 251 0.876404 2.19977404 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 75.1 5.24e-15   NR NLF87244.1 2026714 g5466 i0 58 1.60159362549801 69 27 80.1 1 51 251 6 74 NLF87244.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 402 75.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;