contig_metadata
43 rows where bioproject = "PRJNA879314", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 857934 | 857934 | PRJNA879314_P_NODE_8341_length_247_cov_0.896552_g8291_i0 | PRJNA879314 | 8341 | 247 | 0.896552 | 2.21448344 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 134 | 1.99e-38 | NR | HTH14742.1 | 2053615 | g8291 | i0 | 84.1 | 0.995951417004049 | 82 | 13 | 99.6 | 0 | 1 | 246 | 13 | 94 | HTH14742.1 metalloregulator ArsR/SmtB family transcription factor [Spirochaetia bacterium] | diamond | 246 | 134 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 5961107 | 5961107 | PRJNA879314_P_NODE_4825_length_253_cov_0.866667_g4775_i0 | PRJNA879314 | 4825 | 253 | 0.866667 | 2.19266751 | Bacteria | 2 | Bacteria | Bacteria | 133 | 3.94e-37 | NR | MBO4507376.1 | 1898206 | g4775 | i0 | 74.7 | 11.7628458498024 | 83 | 21 | 98.4 | 0 | 250 | 2 | 9 | 91 | MBO4507376.1 manganese efflux pump [Spirochaetaceae bacterium] | diamond | 2976 | 134 | 0.992537313432836 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 7236058 | 7236058 | PRJNA879314_P_NODE_8206_length_247_cov_0.896552_g8156_i0 | PRJNA879314 | 8206 | 247 | 0.896552 | 2.21448344 | Treponema ruminis | 744515 | Bacteria | Bacteria | 156 | 1.65e-33 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g8156 | i0 | 79.221 | 0.935222672064777 | 231 | 42 | 92 | 4 | 19 | 246 | 224985 | 225212 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 231 | 156 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 8510746 | 8510746 | PRJNA879314_P_NODE_10007_length_244_cov_0.912281_g9957_i0 | PRJNA879314 | 10007 | 244 | 0.912281 | 2.22596564 | Treponema sp. | 166 | Bacteria | Bacteria | 163 | 1.0099999999999999e-47 | NR | MBR4180201.1 | 166 | g9957 | i0 | 97.5 | 2.98770491803279 | 81 | 2 | 99.6 | 0 | 244 | 2 | 67 | 147 | MBR4180201.1 iron-containing alcohol dehydrogenase [Treponema sp.] | diamond | 729 | 163 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 9785768 | 9785768 | PRJNA879314_P_NODE_8728_length_246_cov_0.901734_g8678_i0 | PRJNA879314 | 8728 | 246 | 0.901734 | 2.21826564 | Treponema parvum | 138851 | Bacteria | Bacteria | 209 | 1.25e-49 | NTclustered | gi|2023447176|gb|CP054142.1| | 138851 | g8678 | i0 | 84.434 | 0.861788617886179 | 212 | 33 | 86 | 0 | 2 | 213 | 1579709 | 1579920 | Treponema parvum strain ATCC 700770 chromosome, complete genome | blastn | 212 | 209 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 11444169 | 11444169 | PRJNA879314_P_NODE_2849_length_291_cov_1.206422_g2799_i0 | PRJNA879314 | 2849 | 291 | 1.206422 | 3.51068802 | Bacteria | 2 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1464584672|gb|CP030147.1| | 1137606 | g2799 | i0 | 100 | 1.01030927835052 | 30 | 0 | 10 | 0 | 2 | 31 | 874248 | 874219 | Leptospira mayottensis strain MDI272 chromosome I, complete sequence | blastn | 294 | 56.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mayottensis | ||
| 13611513 | 13611513 | PRJNA879314_P_NODE_5191_length_252_cov_0.871508_g5141_i0 | PRJNA879314 | 5191 | 252 | 0.871508 | 2.19620016 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 159 | 3.78e-45 | NR | MCE1157730.1 | 2053615 | g5141 | i0 | 100 | 0.892857142857143 | 75 | 0 | 89.3 | 0 | 227 | 3 | 1 | 75 | MCE1157730.1 aspartate aminotransferase family protein [Spirochaetia bacterium] | diamond | 225 | 159 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 13611536 | 13611536 | PRJNA879314_P_NODE_7551_length_248_cov_0.891429_g7501_i0 | PRJNA879314 | 7551 | 248 | 0.891429 | 2.21074392 | Treponema peruense | 2787628 | Bacteria | Bacteria | 187 | 5.8899999999999985e-43 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g7501 | i0 | 81.466 | 8.69354838709677 | 232 | 39 | 93 | 3 | 13 | 242 | 1459910 | 1460139 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 2156 | 187 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 17436054 | 17436054 | PRJNA879314_P_NODE_5834_length_251_cov_0.876404_g5784_i0 | PRJNA879314 | 5834 | 251 | 0.876404 | 2.19977404 | Treponema bryantii | 163 | Bacteria | Bacteria | 244 | 3.5000000000000003e-60 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g5784 | i0 | 85.294 | 1.1792828685259 | 238 | 33 | 94 | 2 | 15 | 251 | 386958 | 387194 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 296 | 244 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 18709294 | 18709294 | PRJNA879314_P_NODE_8075_length_247_cov_0.896552_g8025_i0 | PRJNA879314 | 8075 | 247 | 0.896552 | 2.21448344 | Treponema bryantii | 163 | Bacteria | Bacteria | 268 | 2.04e-67 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g8025 | i0 | 86.235 | 1 | 247 | 34 | 100 | 0 | 1 | 247 | 190511 | 190757 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 247 | 268 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 24191863 | 24191863 | PRJNA879314_P_NODE_10519_length_243_cov_0.917647_g10469_i0 | PRJNA879314 | 10519 | 243 | 0.917647 | 2.22988221 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 127 | 2.36e-32 | NR | HEY9593636.1 | 2053615 | g10469 | i0 | 76.3 | 4.9382716049382704 | 80 | 19 | 98.8 | 0 | 4 | 243 | 295 | 374 | HEY9593636.1 ABC transporter ATP-binding protein [Spirochaetia bacterium] | diamond | 1200 | 127 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 25084005 | 25084005 | PRJNA879314_P_NODE_7980_length_247_cov_0.896552_g7930_i0 | PRJNA879314 | 7980 | 247 | 0.896552 | 2.21448344 | Spirochaetales | 136 | Bacteria | Bacteria | 146 | 1.93e-39 | NR | MDR2596915.1 | 166 | g7930 | i0 | 86.4 | 13.7732793522267 | 81 | 11 | 98.4 | 0 | 3 | 245 | 92 | 172 | MDR2596915.1 ATP-binding cassette domain-containing protein [Treponema sp.] | diamond | 3402 | 146 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 26897255 | 26897255 | PRJNA879314_P_NODE_4941_length_252_cov_0.871508_g4891_i0 | PRJNA879314 | 4941 | 252 | 0.871508 | 2.19620016 | Treponema sp. | 166 | Bacteria | Bacteria | 54.3 | 3.39e-6 | NR | MBD5408402.1 | 166 | g4891 | i0 | 95.8 | 0.857142857142857 | 24 | 1 | 28.6 | 0 | 251 | 180 | 475 | 498 | MBD5408402.1 glycine hydroxymethyltransferase [Treponema sp.] | diamond | 216 | 54.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 26928769 | 26928769 | PRJNA879314_P_NODE_4402_length_253_cov_0.866667_g4352_i0 | PRJNA879314 | 4402 | 253 | 0.866667 | 2.19266751 | Treponema sp. | 166 | Bacteria | Bacteria | 178 | 8.46e-54 | NR | WP_407426790.1 | 166 | g4352 | i0 | 95.2 | 5.97628458498024 | 84 | 4 | 99.6 | 0 | 252 | 1 | 60 | 143 | WP_407426790.1 hypothetical protein [Treponema sp.] | diamond | 1512 | 178 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27213163 | 27213163 | PRJNA879314_P_NODE_6782_length_249_cov_0.886364_g6732_i0 | PRJNA879314 | 6782 | 249 | 0.886364 | 2.20704636 | Treponema sp. | 166 | Bacteria | Bacteria | 161 | 2.87e-44 | NR | MBP5359281.1 | 166 | g6732 | i0 | 98.8 | 0.987951807228916 | 82 | 1 | 98.8 | 0 | 3 | 248 | 478 | 559 | MBP5359281.1 ankyrin repeat domain-containing protein [Treponema sp.] | diamond | 246 | 161 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27284564 | 27284564 | PRJNA879314_P_NODE_7323_length_248_cov_0.891429_g7273_i0 | PRJNA879314 | 7323 | 248 | 0.891429 | 2.21074392 | Bacteria | 2 | Bacteria | Bacteria | 130 | 8.43e-36 | NR | PKL24815.1 | 2013835 | g7273 | i0 | 79.3 | 3.96774193548387 | 82 | 17 | 99.2 | 0 | 3 | 248 | 102 | 183 | PKL24815.1 MAG: DNA-binding response regulator [Spirochaetae bacterium HGW-Spirochaetae-3] | diamond | 984 | 131 | 0.99236641221374 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetae bacterium HGW-Spirochaetae-3 | ||||||
| 27308365 | 27308365 | PRJNA879314_P_NODE_9463_length_245_cov_0.906977_g9413_i0 | PRJNA879314 | 9463 | 245 | 0.906977 | 2.22209365 | Treponema sp. | 166 | Bacteria | Bacteria | 127 | 4.59e-33 | NR | MBP5359220.1 | 166 | g9413 | i0 | 100 | 0.73469387755102 | 60 | 0 | 73.5 | 0 | 1 | 180 | 351 | 410 | MBP5359220.1 alpha/beta hydrolase [Treponema sp.] | diamond | 180 | 127 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27537297 | 27537297 | PRJNA879314_P_NODE_10643_length_243_cov_0.917647_g10593_i0 | PRJNA879314 | 10643 | 243 | 0.917647 | 2.22988221 | Sphaerochaeta | 399320 | Bacteria | Bacteria | 145 | 2.02e-39 | NR | HCS37573.1 | 1972642 | g10593 | i0 | 80 | 10.8271604938272 | 80 | 16 | 98.8 | 0 | 241 | 2 | 64 | 143 | HCS37573.1 putative aminohydrolase SsnA [Sphaerochaeta sp.] | diamond | 2631 | 145 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 28034596 | 28034596 | PRJNA879314_P_NODE_8165_length_247_cov_0.896552_g8115_i0 | PRJNA879314 | 8165 | 247 | 0.896552 | 2.21448344 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 126 | 1.08e-31 | NR | MCB1142194.1 | 2026757 | g8115 | i0 | 74.1 | 2.95141700404858 | 81 | 21 | 98.4 | 0 | 247 | 5 | 454 | 534 | MCB1142194.1 GMC family oxidoreductase [Leptospiraceae bacterium] | diamond | 729 | 126 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 28097556 | 28097556 | PRJNA879314_P_NODE_9905_length_244_cov_0.912281_g9855_i0 | PRJNA879314 | 9905 | 244 | 0.912281 | 2.22596564 | Treponema sp. | 166 | Bacteria | Bacteria | 68.2 | 6.48e-13 | NR | MBQ1662098.1 | 166 | g9855 | i0 | 50.7 | 1.61065573770492 | 75 | 34 | 92.2 | 1 | 235 | 11 | 1 | 72 | MBQ1662098.1 hypothetical protein [Treponema sp.] | diamond | 393 | 68.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28571124 | 28571124 | PRJNA879314_P_NODE_4127_length_258_cov_1.043243_g4077_i0 | PRJNA879314 | 4127 | 258 | 1.043243 | 2.69156694 | Treponema sp. | 166 | Bacteria | Bacteria | 147 | 1.01e-41 | NR | MBO4319275.1 | 166 | g4077 | i0 | 92.9 | 1.98837209302326 | 85 | 6 | 98.8 | 0 | 255 | 1 | 199 | 283 | MBO4319275.1 DUF368 domain-containing protein [Treponema sp.] | diamond | 513 | 147 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28571140 | 28571140 | PRJNA879314_P_NODE_8927_length_246_cov_0.901734_g8877_i0 | PRJNA879314 | 8927 | 246 | 0.901734 | 2.21826564 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 64.3 | 9.96e-10 | NR | HCG63578.1 | 1972642 | g8877 | i0 | 44.4 | 2.63414634146341 | 72 | 39 | 87.8 | 1 | 231 | 16 | 653 | 723 | HCG63578.1 hypothetical protein [Sphaerochaeta sp.] | diamond | 648 | 64.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 28886830 | 28886830 | PRJNA879314_P_NODE_5028_length_252_cov_0.871508_g4978_i0 | PRJNA879314 | 5028 | 252 | 0.871508 | 2.19620016 | Treponema sp. | 166 | Bacteria | Bacteria | 156 | 2.06e-46 | NR | MBQ7620355.1 | 166 | g4978 | i0 | 95.2 | 1.97619047619048 | 83 | 4 | 98.8 | 0 | 252 | 4 | 74 | 156 | MBQ7620355.1 hypothetical protein [Treponema sp.] | diamond | 498 | 156 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28886831 | 28886831 | PRJNA879314_P_NODE_5228_length_252_cov_0.871508_g5178_i0 | PRJNA879314 | 5228 | 252 | 0.871508 | 2.19620016 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 58.9 | 7.29e-8 | NR | MBP5328550.1 | 1898206 | g5178 | i0 | 54.3 | 2.73809523809524 | 46 | 21 | 54.8 | 0 | 214 | 77 | 55 | 100 | MBP5328550.1 leucine-rich repeat domain-containing protein [Spirochaetaceae bacterium] | diamond | 690 | 58.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 28981874 | 28981874 | PRJNA879314_P_NODE_11328_length_242_cov_0.923077_g11278_i0 | PRJNA879314 | 11328 | 242 | 0.923077 | 2.23384634 | Treponema sp. | 166 | Bacteria | Bacteria | 143 | 9.71e-39 | NR | MBO4857476.1 | 166 | g11278 | i0 | 82.5 | 0.991735537190083 | 80 | 14 | 99.2 | 0 | 2 | 241 | 310 | 389 | MBO4857476.1 aldehyde dehydrogenase [Treponema sp.] | diamond | 240 | 143 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29021597 | 29021597 | PRJNA879314_P_NODE_4688_length_253_cov_0.866667_g4638_i0 | PRJNA879314 | 4688 | 253 | 0.866667 | 2.19266751 | Spirochaetales | 136 | Bacteria | Bacteria | 117 | 5.36e-29 | NR | MDR1986909.1 | 166 | g4638 | i0 | 60.7 | 9.91304347826087 | 84 | 33 | 99.6 | 0 | 252 | 1 | 59 | 142 | MDR1986909.1 hypothetical protein [Treponema sp.] | diamond | 2508 | 118 | 0.991525423728814 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29171229 | 29171229 | PRJNA879314_P_NODE_10129_length_244_cov_0.912281_g10079_i0 | PRJNA879314 | 10129 | 244 | 0.912281 | 2.22596564 | Rectinemataceae bacterium | 3064674 | Bacteria | Bacteria | 103 | 1.11e-24 | NR | HEY9055470.1 | 3064674 | g10079 | i0 | 65.8 | 0.934426229508197 | 76 | 26 | 93.4 | 0 | 16 | 243 | 90 | 165 | HEY9055470.1 pectinesterase family protein [Rectinemataceae bacterium] | diamond | 228 | 103 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Rectinemataceae | Rectinemataceae bacterium | |||
| 29171234 | 29171234 | PRJNA879314_P_NODE_3309_length_278_cov_1.458537_g3259_i0 | PRJNA879314 | 3309 | 278 | 1.458537 | 4.05473286 | Treponema sp. | 166 | Bacteria | Bacteria | 72.8 | 1.48e-12 | NR | MDR0584525.1 | 166 | g3259 | i0 | 48 | 3.14028776978417 | 75 | 39 | 80.9 | 0 | 277 | 53 | 420 | 494 | MDR0584525.1 ABC transporter ATP-binding protein [Treponema sp.] | diamond | 873 | 72.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29929124 | 29929124 | PRJNA879314_P_NODE_9371_length_245_cov_0.906977_g9321_i0 | PRJNA879314 | 9371 | 245 | 0.906977 | 2.22209365 | Treponema sp. | 166 | Bacteria | Bacteria | 139 | 3.54e-36 | NR | MDR2537099.1 | 166 | g9321 | i0 | 83.1 | 3 | 83 | 12 | 99.2 | 1 | 245 | 3 | 397 | 479 | MDR2537099.1 methionine--tRNA ligase [Treponema sp.] | diamond | 735 | 139 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30718720 | 30718720 | PRJNA879314_P_NODE_10994_length_242_cov_0.923077_g10944_i0 | PRJNA879314 | 10994 | 242 | 0.923077 | 2.23384634 | Treponema sp. | 166 | Bacteria | Bacteria | 61.2 | 7.43e-10 | NR | MBP5442298.1 | 166 | g10944 | i0 | 66.7 | 0.446280991735537 | 36 | 12 | 44.6 | 0 | 109 | 2 | 47 | 82 | MBP5442298.1 phage head-tail connector protein [Treponema sp.] | diamond | 108 | 61.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30781975 | 30781975 | PRJNA879314_P_NODE_314_length_737_cov_1.149096_g271_i0 | PRJNA879314 | 314 | 737 | 1.149096 | 8.46883752 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 219 | 7.169999999999998e-69 | NR | MBU1082594.1 | 2202144 | g271 | i0 | 65.4 | 0.622795115332429 | 153 | 51 | 62.3 | 2 | 62 | 520 | 2 | 152 | MBU1082594.1 class I SAM-dependent methyltransferase [Spirochaetota bacterium] | diamond | 459 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30845250 | 30845250 | PRJNA879314_P_NODE_4594_length_253_cov_0.866667_g4544_i0 | PRJNA879314 | 4594 | 253 | 0.866667 | 2.19266751 | Treponema sp. | 166 | Bacteria | Bacteria | 50.8 | 5.88e-5 | NR | MBP5442291.1 | 166 | g4544 | i0 | 39.7 | 0.74703557312253 | 63 | 38 | 74.7 | 0 | 60 | 248 | 313 | 375 | MBP5442291.1 hypothetical protein [Treponema sp.] | diamond | 189 | 50.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30940133 | 30940133 | PRJNA879314_P_NODE_6314_length_250_cov_0.881356_g6264_i0 | PRJNA879314 | 6314 | 250 | 0.881356 | 2.20339 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 137 | 2.08e-35 | NR | WP_296024674.1 | 162155 | g6264 | i0 | 81.7 | 1.968 | 82 | 15 | 98.4 | 0 | 248 | 3 | 548 | 629 | WP_296024674.1 hypothetical protein [uncultured Treponema sp.] | diamond | 492 | 137 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 31350987 | 31350987 | PRJNA879314_P_NODE_8596_length_246_cov_0.901734_g8546_i0 | PRJNA879314 | 8596 | 246 | 0.901734 | 2.21826564 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 142 | 4.8e-40 | NR | MBQ7508628.1 | 2026792 | g8546 | i0 | 93.6 | 2.85365853658537 | 78 | 5 | 95.1 | 0 | 236 | 3 | 1 | 78 | MBQ7508628.1 PrsW family intramembrane metalloprotease [Spirochaetales bacterium] | diamond | 702 | 142 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 31382628 | 31382628 | PRJNA879314_P_NODE_9056_length_246_cov_0.867052_g9006_i0 | PRJNA879314 | 9056 | 246 | 0.867052 | 2.13294792 | Leptospira idonii | 1193500 | Bacteria | Bacteria | 44.3 | 0.0107 | NR | WP_135758848.1 | 1193500 | g9006 | i0 | 40 | 0.731707317073171 | 60 | 36 | 73.2 | 0 | 239 | 60 | 349 | 408 | WP_135758848.1 hypothetical protein [Leptospira idonii] | diamond | 180 | 44.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira idonii | ||
| 31762031 | 31762031 | PRJNA879314_P_NODE_6997_length_249_cov_0.886364_g6947_i0 | PRJNA879314 | 6997 | 249 | 0.886364 | 2.20704636 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 167 | 7.209999999999999e-48 | NR | MBP5448501.1 | 2026792 | g6947 | i0 | 100 | 3 | 83 | 0 | 100 | 0 | 1 | 249 | 200 | 282 | MBP5448501.1 GNAT family N-acetyltransferase [Spirochaetales bacterium] | diamond | 747 | 167 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32173560 | 32173560 | PRJNA879314_P_NODE_4358_length_253_cov_0.866667_g4308_i0 | PRJNA879314 | 4358 | 253 | 0.866667 | 2.19266751 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 166 | 1.6399999999999998e-47 | NR | MCH3906880.1 | 1972642 | g4308 | i0 | 100 | 0.99604743083004 | 84 | 0 | 99.6 | 0 | 1 | 252 | 170 | 253 | MCH3906880.1 ABC transporter permease [Sphaerochaeta sp.] | diamond | 252 | 166 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 32237028 | 32237028 | PRJNA879314_P_NODE_7538_length_248_cov_0.891429_g7488_i0 | PRJNA879314 | 7538 | 248 | 0.891429 | 2.21074392 | Treponemataceae bacterium | 2854022 | Bacteria | Bacteria | 42 | 0.0479 | NR | HOE08101.1 | 2854022 | g7488 | i0 | 27.5 | 0.834677419354839 | 69 | 49 | 82.3 | 1 | 240 | 37 | 18 | 86 | HOE08101.1 hypothetical protein [Treponemataceae bacterium] | diamond | 207 | 42 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponemataceae bacterium | |||
| 32300284 | 32300284 | PRJNA879314_P_NODE_10899_length_242_cov_0.923077_g10849_i0 | PRJNA879314 | 10899 | 242 | 0.923077 | 2.23384634 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 114 | 8.55e-29 | NR | MBR1938557.1 | 2026792 | g10849 | i0 | 65 | 0.991735537190083 | 80 | 28 | 99.2 | 0 | 242 | 3 | 7 | 86 | MBR1938557.1 TIM barrel protein [Spirochaetales bacterium] | diamond | 240 | 114 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32331944 | 32331944 | PRJNA879314_P_NODE_7879_length_247_cov_0.896552_g7829_i0 | PRJNA879314 | 7879 | 247 | 0.896552 | 2.21448344 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 156 | 5.31e-45 | NR | MBN8217333.1 | 2202144 | g7829 | i0 | 98.8 | 0.995951417004049 | 82 | 1 | 99.6 | 0 | 247 | 2 | 48 | 129 | MBN8217333.1 AEC family transporter [Spirochaetota bacterium] | diamond | 246 | 156 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 32363427 | 32363427 | PRJNA879314_P_NODE_4359_length_253_cov_0.866667_g4309_i0 | PRJNA879314 | 4359 | 253 | 0.866667 | 2.19266751 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 106 | 1.37e-24 | NR | MEI8094957.1 | 2026792 | g4309 | i0 | 65.5 | 0.99604743083004 | 84 | 29 | 99.6 | 0 | 253 | 2 | 37 | 120 | MEI8094957.1 DUF5312 family protein [Spirochaetales bacterium] | diamond | 252 | 106 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32710444 | 32710444 | PRJNA879314_P_NODE_10480_length_243_cov_0.917647_g10430_i0 | PRJNA879314 | 10480 | 243 | 0.917647 | 2.22988221 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 158 | 9.62e-45 | NR | MBQ7729393.1 | 2026792 | g10430 | i0 | 98.8 | 6.91358024691358 | 80 | 1 | 98.8 | 0 | 3 | 242 | 40 | 119 | MBQ7729393.1 ABC transporter permease [Spirochaetales bacterium] | diamond | 1680 | 158 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32773402 | 32773402 | PRJNA879314_P_NODE_10960_length_242_cov_0.923077_g10910_i0 | PRJNA879314 | 10960 | 242 | 0.923077 | 2.23384634 | Treponema sp. | 166 | Bacteria | Bacteria | 153 | 8.7e-42 | NR | MBO7638666.1 | 166 | g10910 | i0 | 92.5 | 0.991735537190083 | 80 | 6 | 99.2 | 0 | 2 | 241 | 264 | 343 | MBO7638666.1 response regulator [Treponema sp.] | diamond | 240 | 153 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;