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contig_metadata

19 rows where bioproject = "PRJNA879314", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 19 ✖

tax_clade 1

  • Bacteria candidate phyla · 19 ✖

bioproject 1

  • PRJNA879314 · 19 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9785720 9785720 PRJNA879314_P_NODE_568_length_554_cov_1.417879_g518_i0 PRJNA879314 568 554 1.417879 7.85504966 Minisyncoccota bacterium 2053589 Bacteria Bacteria 343 1.73e-114   NR MDD3190650.1 2053589 g518 i0 95.7 2.96750902527076 184 8 99.6 0 1 552 104 287 MDD3190650.1 F0F1 ATP synthase subunit beta [Candidatus Paceibacterota bacterium] diamond 1644 343 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
13611495 13611495 PRJNA879314_P_NODE_3851_length_265_cov_1.218750_g3801_i0 PRJNA879314 3851 265 1.21875 3.2296875 Minisyncoccota bacterium 2053589 Bacteria Bacteria 175 1.19e-48   NR MFA7171188.1 2053589 g3801 i0 93.2 2.98867924528302 88 6 99.6 0 264 1 898 985 MFA7171188.1 DNA-directed RNA polymerase subunit beta' [Candidatus Paceibacterota bacterium] diamond 792 175 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26802038 26802038 PRJNA879314_P_NODE_581_length_549_cov_0.983193_g531_i0 PRJNA879314 581 549 0.983193 5.39772957 Minisyncoccota bacterium 2053589 Bacteria Bacteria 85.1 1.76e-18   NR MDD3006963.1 2053589 g531 i0 72 0.819672131147541 50 14 27.3 0 152 301 1 50 MDD3006963.1 lysine biosynthesis protein LysW [Candidatus Paceibacterota bacterium] diamond 450 85.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27655763 27655763 PRJNA879314_P_NODE_5844_length_251_cov_0.876404_g5794_i0 PRJNA879314 5844 251 0.876404 2.19977404 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 7.49e-7   NR MDD3190947.1 2053589 g5794 i0 33 3.14342629482072 88 54 99.2 2 1 249 70 157 MDD3190947.1 TIGR00282 family metallophosphoesterase [Candidatus Paceibacterota bacterium] diamond 789 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28192079 28192079 PRJNA879314_P_NODE_9066_length_246_cov_0.861272_g9016_i0 PRJNA879314 9066 246 0.861272 2.11872912 Minisyncoccota bacterium 2053589 Bacteria Bacteria 52.8 1.1e-5   NR MDD3006631.1 2053589 g9016 i0 62.5 0.780487804878049 32 12 39 0 238 143 475 506 MDD3006631.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 192 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28886834 28886834 PRJNA879314_P_NODE_6448_length_250_cov_0.881356_g6398_i0 PRJNA879314 6448 250 0.881356 2.20339 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.9 7.85e-8   NR MDD3190458.1 2053589 g6398 i0 44 3.288 91 38 93.6 4 15 248 643 733 MDD3190458.1 beta-propeller domain-containing protein [Candidatus Paceibacterota bacterium] diamond 822 58.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29013551 29013551 PRJNA879314_P_NODE_1848_length_337_cov_0.833333_g1798_i0 PRJNA879314 1848 337 0.833333 2.80833221 Minisyncoccota bacterium 2053589 Bacteria Bacteria 176 7.21e-50   NR MDD3940351.1 2053589 g1798 i0 71.2 1.97626112759644 111 32 98.8 0 5 337 265 375 MDD3940351.1 pyridoxal-dependent decarboxylase [Candidatus Paceibacterota bacterium] diamond 666 176 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29108037 29108037 PRJNA879314_P_NODE_1048_length_414_cov_1.284457_g998_i0 PRJNA879314 1048 414 1.284457 5.31765198 Minisyncoccota bacterium 2053589 Bacteria Bacteria 204 1.66e-62   NR MDD3190166.1 2053589 g998 i0 67.2 4.94927536231884 137 45 99.3 0 3 413 3 139 MDD3190166.1 thiamine pyrophosphate-dependent enzyme [Candidatus Paceibacterota bacterium] diamond 2049 204 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29202810 29202810 PRJNA879314_P_NODE_2489_length_305_cov_1.008621_g2439_i0 PRJNA879314 2489 305 1.008621 3.07629405 Minisyncoccota bacterium 2053589 Bacteria Bacteria 114 1.0600000000000002e-27   NR MFA6097875.1 2053589 g2439 i0 59.4 2.93114754098361 101 41 99.3 0 3 305 66 166 MFA6097875.1 DNA recombination protein RmuC [Candidatus Paceibacterota bacterium] diamond 894 114 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29431460 29431460 PRJNA879314_P_NODE_7309_length_248_cov_0.891429_g7259_i0 PRJNA879314 7309 248 0.891429 2.21074392 Bacillati 1783272 Bacteria Bacteria 63.5 1.91e-9   NR HEU0085857.1 2053589 g7259 i0 47.1 3.60483870967742 85 33 93.1 2 18 248 642 722 HEU0085857.1 immunoglobulin-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 894 63.9 0.993740219092332 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29929112 29929112 PRJNA879314_P_NODE_3371_length_277_cov_1.147059_g3321_i0 PRJNA879314 3371 277 1.147059 3.17735343 Minisyncoccota bacterium 2053589 Bacteria Bacteria 129 2.7499999999999996e-32   NR MDD3006733.1 2053589 g3321 i0 68.1 3.92057761732852 91 29 98.6 0 275 3 609 699 MDD3006733.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1086 129 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30781976 30781976 PRJNA879314_P_NODE_3334_length_278_cov_0.897561_g3284_i0 PRJNA879314 3334 278 0.897561 2.49521958 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.6 1.97e-7   NR MFA7170109.1 2053589 g3284 i0 37.8 0.798561151079137 74 46 79.9 0 1 222 88 161 MFA7170109.1 regulatory protein RecX [Candidatus Paceibacterota bacterium] diamond 222 56.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30876770 30876770 PRJNA879314_P_NODE_2074_length_324_cov_1.203187_g2024_i0 PRJNA879314 2074 324 1.203187 3.89832588 Minisyncoccota bacterium 2053589 Bacteria Bacteria 147 1.23e-38   NR MDD3292739.1 2053589 g2024 i0 65.1 3.92592592592593 106 37 98.1 0 319 2 245 350 MDD3292739.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1272 147 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31066608 31066608 PRJNA879314_P_NODE_2895_length_290_cov_1.078341_g2845_i0 PRJNA879314 2895 290 1.078341 3.1271889 Minisyncoccota bacterium 2053589 Bacteria Bacteria 136 4.67e-38   NR MDD3190360.1 2053589 g2845 i0 70.8 0.993103448275862 96 28 99.3 0 1 288 80 175 MDD3190360.1 50S ribosomal protein L3 [Candidatus Paceibacterota bacterium] diamond 288 136 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31350985 31350985 PRJNA879314_P_NODE_7776_length_248_cov_0.880000_g7726_i0 PRJNA879314 7776 248 0.88 2.1824 Minisyncoccota bacterium 2053589 Bacteria Bacteria 127 6.189999999999999e-32   NR MFA7169741.1 2053589 g7726 i0 80.5 0.991935483870968 82 16 99.2 0 3 248 359 440 MFA7169741.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Candidatus Paceibacterota bacterium] diamond 246 127 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31983427 31983427 PRJNA879314_P_NODE_2438_length_307_cov_1.333333_g2388_i0 PRJNA879314 2438 307 1.333333 4.09333231 Minisyncoccota bacterium 2053589 Bacteria Bacteria 83.6 2.72e-16   NR MDD3190193.1 2053589 g2388 i0 39.6 1.03583061889251 106 59 99.7 4 306 1 224 328 MDD3190193.1 pilin [Candidatus Paceibacterota bacterium] diamond 318 83.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32521719 32521719 PRJNA879314_P_NODE_8439_length_247_cov_0.873563_g8389_i0 PRJNA879314 8439 247 0.873563 2.15770061 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.7 9.53e-22   NR MDD3006331.1 2053589 g8389 i0 61 0.995951417004049 82 29 99.6 2 1 246 33 111 MDD3006331.1 NUDIX domain-containing protein [Candidatus Paceibacterota bacterium] diamond 246 94.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32616105 32616105 PRJNA879314_P_NODE_6660_length_249_cov_1.329545_g6610_i0 PRJNA879314 6660 249 1.329545 3.31056705 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.7 4.1e-22   NR MDD3190195.1 2053589 g6610 i0 58.6 2.51807228915663 70 29 84.3 0 210 1 18 87 MDD3190195.1 class I SAM-dependent methyltransferase [Candidatus Paceibacterota bacterium] diamond 627 94.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32812909 32812909 PRJNA879314_P_NODE_8280_length_247_cov_0.896552_g8230_i0 PRJNA879314 8280 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 103 1.3799999999999998e-23   NR MFA7171404.1 2053589 g8230 i0 60.5 5.96356275303644 81 31 98.4 1 2 244 396 475 MFA7171404.1 glucose-1-phosphate thymidylyltransferase [Candidatus Paceibacterota bacterium] diamond 1473 103 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;