RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA879221" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA879221 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8510121 8510121 PRJNA879221_P_NODE_54727_length_246_cov_0.890173_g54587_i0 PRJNA879221 54727 246 0.890173 2.18982558 Phycisphaerales bacterium 2052180 Bacteria Bacteria 72.4 1.27e-12   NR MCA9286879.1 2052180 g54587 i0 52.6 2.8780487804878 76 34 90.2 1 23 244 316 391 MCA9286879.1 DUF418 domain-containing protein [Phycisphaerales bacterium] diamond 708 72.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
11060662 11060662 PRJNA879221_P_NODE_38509_length_281_cov_1.360577_g38369_i0 PRJNA879221 38509 281 1.360577 3.82322137 Gemmataceae bacterium 2052164 Bacteria Bacteria 150 1.22e-41   NR MFO0966402.1 2052164 g38369 i0 89.4 2.71174377224199 85 9 90.7 0 1 255 86 170 MFO0966402.1 FAD-binding protein [Gemmataceae bacterium] diamond 762 150 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
12336406 12336406 PRJNA879221_P_NODE_61870_length_242_cov_0.911243_g61730_i0 PRJNA879221 61870 242 0.911243 2.20520806 Aquisphaera giovannonii 406548 Bacteria Bacteria 150 7.509999999999998e-32   NTclustered gi|1730068067|gb|CP042997.1| 406548 g61730 i0 85.616 0.603305785123967 146 17 60 4 99 242 2984225 2984082 Aquisphaera giovannonii strain OJF2 chromosome, complete genome blastn 146 150 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Aquisphaera Aquisphaera giovannonii
25083419 25083419 PRJNA879221_P_NODE_6920_length_709_cov_8.594340_g6789_i0 PRJNA879221 6920 709 8.59434 60.9338706 Pirellulaceae bacterium 2699754 Bacteria Bacteria 201 2.0399999999999997e-57   NR MDX1947833.1 2699754 g6789 i0 60.7 0.634696755994358 150 59 63.5 0 689 240 208 357 MDX1947833.1 DUF3386 family protein [Pirellulaceae bacterium] diamond 450 201 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
29116104 29116104 PRJNA879221_P_NODE_48788_length_250_cov_0.870056_g48648_i0 PRJNA879221 48788 250 0.870056 2.17514 Pirellulales 2691354 Bacteria Bacteria 132 5.49e-35   NR MBA4106052.1 117 g48648 i0 79.3 1.968 82 17 98.4 0 246 1 176 257 MBA4106052.1 hypothetical protein [Pirellula sp.] diamond 492 132 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Pirellula Pirellula sp.
29549784 29549784 PRJNA879221_P_NODE_37630_length_285_cov_1.283019_g37490_i0 PRJNA879221 37630 285 1.283019 3.65660415 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 139 7.65e-36   NR MBX3452621.1 2026779 g37490 i0 77.9 1 95 21 100 0 1 285 1211 1305 MBX3452621.1 autotransporter domain-containing protein [Planctomycetaceae bacterium] diamond 285 139 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
29897433 29897433 PRJNA879221_P_NODE_52891_length_247_cov_0.885057_g52751_i0 PRJNA879221 52891 247 0.885057 2.18609079 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 76.3 6.14e-14   NR MCC7191929.1 2026777 g52751 i0 60.9 0.777327935222672 64 24 76.5 1 190 2 11 74 MCC7191929.1 iron-sulfur cluster-binding protein [Phycisphaeraceae bacterium] diamond 192 76.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
31003225 31003225 PRJNA879221_P_NODE_58814_length_244_cov_0.900585_g58674_i0 PRJNA879221 58814 244 0.900585 2.1974274 Pirellulales bacterium 2715253 Bacteria Bacteria 68.9 2.32e-11   NR HEV2970763.1 2715253 g58674 i0 62.1 0.811475409836066 66 25 81.1 0 199 2 1446 1511 HEV2970763.1 autotransporter-associated beta strand repeat-containing protein [Pirellulales bacterium] diamond 198 68.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
31319183 31319183 PRJNA879221_P_NODE_58275_length_244_cov_0.900585_g58135_i0 PRJNA879221 58275 244 0.900585 2.1974274 Gemmata sp. 1914242 Bacteria Bacteria 71.2 3.47e-12   NR MFM8272512.1 1914242 g58135 i0 53.8 3.84836065573771 78 36 95.9 0 5 238 227 304 MFM8272512.1 peptidylprolyl isomerase [Gemmata sp.] diamond 939 71.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Gemmata Gemmata sp.
32363412 32363412 PRJNA879221_P_NODE_42559_length_264_cov_1.356021_g42419_i0 PRJNA879221 42559 264 1.356021 3.57989544 Candidatus Scalindua sediminis 2798304 Bacteria Bacteria 174 3.07e-52   NR MEE9260883.1 2798304 g42419 i0 94.3 0.988636363636364 87 5 98.9 0 3 263 126 212 MEE9260883.1 glycosyltransferase family 2 protein [Candidatus Scalindua sediminis] diamond 261 174 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales Candidatus Scalinduaceae Candidatus Scalindua Candidatus Scalindua sediminis
32489929 32489929 PRJNA879221_P_NODE_44399_length_256_cov_2.174863_g44259_i0 PRJNA879221 44399 256 2.174863 5.56764928 Lacipirellulaceae bacterium 2691534 Bacteria Bacteria 99 1.57e-24   NR HEX5471700.1 2691534 g44259 i0 69.2 1.58203125 65 20 76.2 0 1 195 57 121 HEX5471700.1 type II toxin-antitoxin system RelE/ParE family toxin [Lacipirellulaceae bacterium] diamond 405 99 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Lacipirellulaceae   Lacipirellulaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;