RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879221", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA879221 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27907837 27907837 PRJNA879221_P_NODE_10725_length_558_cov_3.352577_g10587_i0 PRJNA879221 10725 558 3.352577 18.70737966 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 110 2.65e-24   NR HEY4002766.1 3036772 g10587 i0 44.3 0.752688172043011 140 72 73.1 5 420 13 57 194 HEY4002766.1 hypothetical protein [Candidatus Xenobia bacterium] diamond 420 110 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium
28729106 28729106 PRJNA879221_P_NODE_11607_length_534_cov_3.140998_g11468_i0 PRJNA879221 11607 534 3.140998 16.77292932 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 175 1.7299999999999994e-48   NR MFN8610157.1 3107663 g11468 i0 55.2 1.92134831460674 172 77 96.6 0 517 2 346 517 MFN8610157.1 DNA repair protein RecN [Vulcanimicrobiota bacterium] diamond 1026 175 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;