RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879067", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA879067 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7233703 7233703 PRJNA879067_P_NODE_56666_length_472_cov_10.596491_g53181_i0 PRJNA879067 56666 472 10.596491 50.01543752 uncultured crenarchaeote 29281 Archaea Archaea 638 2.77e-178   NTclustered gi|22797874|emb|AJ496176.1| 29281 g53181 i0 92.955 47.2944915254237 440 28 93 3 9 447 6340 5903 Uncultured crenarchaeote 34 kb genomic fragment blastn 22323 638 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
31097784 31097784 PRJNA879067_P_NODE_70655_length_385_cov_0.900641_g67170_i0 PRJNA879067 70655 385 0.900641 3.46746785 Desulfurococcales archaeon 2480821 Archaea Archaea 68.9 3.39e-12   NR MEB3780172.1 2480821 g67170 i0 43.5 0.662337662337662 85 42 66.2 1 3 257 33 111 MEB3780172.1 YbjQ family protein [Desulfurococcales archaeon] diamond 255 68.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales     Desulfurococcales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;