contig_metadata
44 rows where bioproject = "PRJNA879067" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 855722 | 855722 | PRJNA879067_P_NODE_62741_length_431_cov_2.966480_g59256_i0 | PRJNA879067 | 62741 | 431 | 2.96648 | 12.7855288 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 732 | 0 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g59256 | i0 | 99.502 | 178.983758700696 | 402 | 2 | 93 | 0 | 30 | 431 | 753237 | 753638 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 77142 | 732 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 2131723 | 2131723 | PRJNA879067_P_NODE_90402_length_297_cov_1.375000_g86916_i0 | PRJNA879067 | 90402 | 297 | 1.375 | 4.08375 | Brachyspira murdochii | 84378 | Bacteria | Bacteria | 499 | 8.2e-137 | NTclustered | gi|296016874|gb|CP001959.1| | 526224 | g86916 | i0 | 99.634 | 1.01683501683502 | 273 | 1 | 92 | 0 | 25 | 297 | 514628 | 514900 | Brachyspira murdochii DSM 12563, complete genome | blastn | 302 | 499 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira murdochii | ||
| 3404664 | 3404664 | PRJNA879067_P_NODE_108583_length_244_cov_0.900585_g105097_i0 | PRJNA879067 | 108583 | 244 | 0.900585 | 2.1974274 | Brachyspira murdochii | 84378 | Bacteria | Bacteria | 60.2 | 1.32e-4 | NTclustered | gi|296016874|gb|CP001959.1| | 526224 | g105097 | i0 | 94.737 | 0.418032786885246 | 38 | 2 | 16 | 0 | 201 | 238 | 3184156 | 3184119 | Brachyspira murdochii DSM 12563, complete genome | blastn | 102 | 60.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira murdochii | ||
| 3405423 | 3405423 | PRJNA879067_P_NODE_29643_length_770_cov_11.177905_g26343_i0 | PRJNA879067 | 29643 | 770 | 11.177905 | 86.0698685 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 170 | 2.22e-49 | NR | NCB03113.1 | 2053615 | g26343 | i0 | 89.2 | 0.397402597402597 | 102 | 11 | 39.7 | 0 | 306 | 1 | 59 | 160 | NCB03113.1 hypothetical protein [Spirochaetia bacterium] | diamond | 306 | 170 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 3790788 | 3790788 | PRJNA879067_P_NODE_21723_length_955_cov_21.062358_g18715_i0 | PRJNA879067 | 21723 | 955 | 21.062358 | 201.1455189 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.027 | NTclustered | gi|2537508579|gb|CP124112.1| | 64897 | g18715 | i0 | 100 | 0.0910994764397906 | 29 | 0 | 3 | 0 | 829 | 857 | 99 | 127 | Borreliella bissettiae strain Pgeb plasmid lp54, complete sequence | blastn | 87 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella bissettiae | ||
| 4684270 | 4684270 | PRJNA879067_P_NODE_71604_length_379_cov_7.196078_g68119_i0 | PRJNA879067 | 71604 | 379 | 7.196078 | 27.27313562 | Treponema peruense | 2787628 | Bacteria | Bacteria | 640 | 6.059999999999999e-179 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g68119 | i0 | 99.157 | 142.390501319261 | 356 | 1 | 94 | 2 | 1 | 355 | 1009822 | 1009468 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 53966 | 640 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 5958791 | 5958791 | PRJNA879067_P_NODE_58845_length_457_cov_4.216146_g55360_i0 | PRJNA879067 | 58845 | 457 | 4.216146 | 19.26778722 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 486 | 1.0299999999999999e-132 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g55360 | i0 | 87.215 | 0.958424507658643 | 438 | 43 | 93 | 6 | 31 | 457 | 3490218 | 3489783 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 438 | 486 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 8509372 | 8509372 | PRJNA879067_P_NODE_93887_length_284_cov_1.497630_g90401_i0 | PRJNA879067 | 93887 | 284 | 1.49763 | 4.2532692 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 342 | 1.3899999999999999e-89 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g90401 | i0 | 90.945 | 0.894366197183099 | 254 | 23 | 89 | 0 | 3 | 256 | 39076 | 38823 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 254 | 342 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 8509434 | 8509434 | PRJNA879067_P_NODE_95927_length_277_cov_1.465686_g92441_i0 | PRJNA879067 | 95927 | 277 | 1.465686 | 4.05995022 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 291 | 4.96e-74 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g92441 | i0 | 85.56 | 1 | 277 | 40 | 100 | 0 | 1 | 277 | 3365652 | 3365376 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 277 | 291 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 8892179 | 8892179 | PRJNA879067_P_NODE_80607_length_336_cov_2.973384_g77121_i0 | PRJNA879067 | 80607 | 336 | 2.973384 | 9.99057024 | Treponema | 157 | Bacteria | Bacteria | 337 | 7.81e-88 | NTclustered | gi|470488561|ref|NR_076878.1| | 81028 | g77121 | i0 | 87.586 | 96.5119047619048 | 290 | 36 | 86 | 0 | 14 | 303 | 290 | 1 | Treponema brennaborense strain DD5/3 23S ribosomal RNA gene, complete sequence | blastn | 32428 | 340 | 0.991176470588235 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 11059302 | 11059302 | PRJNA879067_P_NODE_6229_length_2016_cov_29.138446_g4624_i0 | PRJNA879067 | 6229 | 2016 | 29.138446 | 587.43107136 | Treponema denticola | 158 | Bacteria | Bacteria | 3607 | 0 | NTclustered | gi|2277007739|gb|CP038800.1| | 158 | g4624 | i0 | 99.008 | 28.6666666666667 | 2016 | 15 | 100 | 4 | 1 | 2016 | 2050029 | 2052039 | Treponema denticola strain ATCC 700768 chromosome, complete genome | blastn | 57792 | 3607 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 12333386 | 12333386 | PRJNA879067_P_NODE_20590_length_990_cov_45.406761_g17638_i0 | PRJNA879067 | 20590 | 990 | 45.406761 | 449.5269339 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 963 | 0 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g17638 | i0 | 84.861 | 0.980808080808081 | 971 | 129 | 97 | 17 | 26 | 987 | 3255592 | 3256553 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 971 | 963 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 12334334 | 12334334 | PRJNA879067_P_NODE_48150_length_540_cov_33.520343_g44672_i0 | PRJNA879067 | 48150 | 540 | 33.520343 | 181.0098522 | Borreliella garinii | 29519 | Bacteria | Bacteria | 56.5 | 0.004 | NTclustered | gi|2646141648|gb|CP117840.1| | 29519 | g44672 | i0 | 100 | 0.0555555555555556 | 30 | 0 | 6 | 0 | 319 | 348 | 3935 | 3964 | Borreliella garinii strain 17-63N1 plasmid p_cp26, complete sequence | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 12718812 | 12718812 | PRJNA879067_P_NODE_76110_length_356_cov_4.162544_g72624_i0 | PRJNA879067 | 76110 | 356 | 4.162544 | 14.81865664 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 60.2 | 2.01e-4 | NTclustered | gi|2612877174|gb|CP136243.1| | 173 | g72624 | i0 | 100 | 40.4494382022472 | 32 | 0 | 9 | 0 | 325 | 356 | 2183964 | 2183995 | Leptospira interrogans strain CUDO5 chromosome I, complete sequence | blastn | 14400 | 60.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira interrogans | ||
| 12718918 | 12718918 | PRJNA879067_P_NODE_90110_length_298_cov_1.711111_g86624_i0 | PRJNA879067 | 90110 | 298 | 1.711111 | 5.09911078 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.028 | NTclustered | gi|225213769|gb|CP001357.1| | 565034 | g86624 | i0 | 100 | 0.187919463087248 | 28 | 0 | 9 | 0 | 198 | 225 | 2151293 | 2151320 | Brachyspira hyodysenteriae WA1, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 14882480 | 14882480 | PRJNA879067_P_NODE_25172_length_863_cov_11.665823_g21997_i0 | PRJNA879067 | 25172 | 863 | 11.665823 | 100.67605249 | Treponema | 157 | Bacteria | Bacteria | 147 | 2.74e-38 | NR | WP_253689418.1 | 158 | g21997 | i0 | 53.7 | 1.27578215527231 | 121 | 56 | 42.1 | 0 | 374 | 736 | 161 | 281 | WP_253689418.1 GerMN domain-containing protein [Treponema denticola] | diamond | 1101 | 148 | 0.993243243243243 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 19980723 | 19980723 | PRJNA879067_P_NODE_14036_length_1275_cov_9.971714_g11503_i0 | PRJNA879067 | 14036 | 1275 | 9.971714 | 127.1393535 | Leptospira saintgironsiae | 2023183 | Bacteria | Bacteria | 177 | 9.84e-51 | NR | WP_100711110.1 | 2023183 | g11503 | i0 | 76.7 | 0.282352941176471 | 120 | 28 | 28.2 | 0 | 1080 | 721 | 1 | 120 | WP_100711110.1 hypothetical protein [Leptospira saintgironsiae] | diamond | 360 | 177 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira saintgironsiae | ||
| 19982627 | 19982627 | PRJNA879067_P_NODE_73596_length_369_cov_2.050676_g70111_i0 | PRJNA879067 | 73596 | 369 | 2.050676 | 7.56699444 | Treponema peruense | 2787628 | Bacteria | Bacteria | 244 | 5.389999999999999e-60 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g70111 | i0 | 80.757 | 1.21138211382114 | 317 | 57 | 85 | 4 | 28 | 342 | 1354837 | 1355151 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 447 | 244 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 22531432 | 22531432 | PRJNA879067_P_NODE_31058_length_746_cov_6.332838_g27727_i0 | PRJNA879067 | 31058 | 746 | 6.332838 | 47.24297148 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 1168 | 0 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g27727 | i0 | 95.027 | 72.3793565683646 | 744 | 36 | 99 | 1 | 1 | 744 | 2680210 | 2680952 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 53995 | 1168 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 22916864 | 22916864 | PRJNA879067_P_NODE_71598_length_379_cov_9.258170_g68113_i0 | PRJNA879067 | 71598 | 379 | 9.25817 | 35.0884643 | Treponema | 157 | Bacteria | Bacteria | 643 | 4.679999999999999e-180 | NTclustered | gi|2189493055|gb|CP091738.1| | 167 | g68113 | i0 | 100 | 58.3324538258575 | 348 | 0 | 92 | 0 | 1 | 348 | 286643 | 286296 | MAG: Treponema succinifaciens isolate nC27_bin.114.fa chromosome | blastn | 22108 | 643 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 22916883 | 22916883 | PRJNA879067_P_NODE_74018_length_367_cov_1.571429_g70533_i0 | PRJNA879067 | 74018 | 367 | 1.571429 | 5.76714443 | Sphaerochaeta | 399320 | Bacteria | Bacteria | 326 | 1.86e-84 | NTclustered | gi|324025087|gb|CP002541.1| | 158189 | g70533 | i0 | 85.761 | 106.359673024523 | 309 | 42 | 84 | 2 | 37 | 344 | 1241515 | 1241822 | Sphaerochaeta globosa str. Buddy, complete genome | blastn | 39034 | 326 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta globosa | ||
| 25082286 | 25082286 | PRJNA879067_P_NODE_84680_length_319_cov_2.890244_g81194_i0 | PRJNA879067 | 84680 | 319 | 2.890244 | 9.21987836 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 545 | 1.13e-150 | NTclustered | gi|328447254|gb|CP002631.1| | 869209 | g81194 | i0 | 100 | 1.85266457680251 | 295 | 0 | 92 | 0 | 1 | 295 | 1050075 | 1049781 | Treponema succinifaciens DSM 2489, complete genome | blastn | 591 | 545 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 26770436 | 26770436 | PRJNA879067_P_NODE_36181_length_669_cov_10.414430_g32771_i0 | PRJNA879067 | 36181 | 669 | 10.41443 | 69.6725367 | Leptospira neocaledonica | 2023192 | Bacteria | Bacteria | 209 | 2.8399999999999997e-61 | NR | WP_244283330.1 | 2023192 | g32771 | i0 | 79.2 | 0.538116591928251 | 120 | 25 | 53.8 | 0 | 22 | 381 | 187 | 306 | WP_244283330.1 hypothetical protein [Leptospira neocaledonica] | diamond | 360 | 209 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira neocaledonica | ||
| 26865698 | 26865698 | PRJNA879067_P_NODE_39141_length_633_cov_4.871429_g35701_i0 | PRJNA879067 | 39141 | 633 | 4.871429 | 30.83614557 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 271 | 2.17e-88 | NR | MCI6115212.1 | 2026792 | g35701 | i0 | 99.2 | 0.630331753554502 | 133 | 1 | 63 | 0 | 233 | 631 | 1 | 133 | MCI6115212.1 nucleoside triphosphate pyrophosphohydrolase [Spirochaetales bacterium] | diamond | 399 | 271 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 27339892 | 27339892 | PRJNA879067_P_NODE_88303_length_305_cov_1.327586_g84817_i0 | PRJNA879067 | 88303 | 305 | 1.327586 | 4.0491373 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 91.7 | 5.39e-19 | NR | WP_288724535.1 | 162155 | g84817 | i0 | 57.1 | 0.757377049180328 | 77 | 33 | 75.7 | 0 | 233 | 3 | 1710 | 1786 | WP_288724535.1 LPD23 domain-containing protein [uncultured Treponema sp.] | diamond | 231 | 91.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 28413388 | 28413388 | PRJNA879067_P_NODE_111326_length_239_cov_2.783133_g107840_i0 | PRJNA879067 | 111326 | 239 | 2.783133 | 6.65168787 | Leptospira saintgironsiae | 2023183 | Bacteria | Bacteria | 155 | 4.44e-44 | NR | WP_100711056.1 | 2023183 | g107840 | i0 | 93.7 | 0.99163179916318 | 79 | 5 | 99.2 | 0 | 1 | 237 | 71 | 149 | WP_100711056.1 AI-2E family transporter [Leptospira saintgironsiae] | diamond | 237 | 155 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira saintgironsiae | ||
| 28445028 | 28445028 | PRJNA879067_P_NODE_102146_length_254_cov_1.701657_g98660_i0 | PRJNA879067 | 102146 | 254 | 1.701657 | 4.32220878 | Treponema denticola | 158 | Bacteria | Bacteria | 80.5 | 2.13e-15 | NR | WP_255811157.1 | 158 | g98660 | i0 | 66 | 0.625984251968504 | 53 | 18 | 62.6 | 0 | 159 | 1 | 1 | 53 | WP_255811157.1 hypothetical protein [Treponema denticola] | diamond | 159 | 80.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 28760515 | 28760515 | PRJNA879067_P_NODE_81807_length_331_cov_2.434109_g78321_i0 | PRJNA879067 | 81807 | 331 | 2.434109 | 8.05690079 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 176 | 8.83e-53 | NR | WP_288515970.1 | 162155 | g78321 | i0 | 96.7 | 0.833836858006042 | 92 | 3 | 83.4 | 0 | 313 | 38 | 173 | 264 | WP_288515970.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [uncultured Treponema sp.] | diamond | 276 | 176 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 28886807 | 28886807 | PRJNA879067_P_NODE_99688_length_263_cov_2.705263_g96202_i0 | PRJNA879067 | 99688 | 263 | 2.705263 | 7.11484169 | Leptospira fletcheri | 2484981 | Bacteria | Bacteria | 70.9 | 3.6e-12 | NR | WP_135766764.1 | 2484981 | g96202 | i0 | 69 | 0.479087452471483 | 42 | 13 | 47.9 | 0 | 261 | 136 | 9 | 50 | WP_135766764.1 IS1595 family transposase [Leptospira fletcheri] | diamond | 126 | 70.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira fletcheri | ||
| 29486575 | 29486575 | PRJNA879067_P_NODE_43990_length_580_cov_3.487179_g40529_i0 | PRJNA879067 | 43990 | 580 | 3.487179 | 20.2256382 | Treponema endosymbiont of Eucomonympha sp. | 1580831 | Bacteria | Bacteria | 213 | 5.33e-65 | NR | WP_228378571.1 | 1580831 | g40529 | i0 | 86.7 | 1.30344827586207 | 128 | 16 | 66.2 | 1 | 23 | 406 | 9 | 135 | WP_228378571.1 HAMP domain-containing protein, partial [Treponema endosymbiont of Eucomonympha sp.] | diamond | 756 | 213 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 29675939 | 29675939 | PRJNA879067_P_NODE_84510_length_320_cov_1.781377_g81024_i0 | PRJNA879067 | 84510 | 320 | 1.781377 | 5.7004064 | Leptospira wolffii | 409998 | Bacteria | Bacteria | 176 | 1.56e-53 | NR | WP_135699651.1 | 409998 | g81024 | i0 | 81.2 | 0.946875 | 101 | 19 | 94.7 | 0 | 17 | 319 | 72 | 172 | WP_135699651.1 SOS response-associated peptidase [Leptospira wolffii] | diamond | 303 | 176 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira wolffii | ||
| 30126277 | 30126277 | PRJNA879067_P_NODE_94112_length_283_cov_2.128571_g90626_i0 | PRJNA879067 | 94112 | 283 | 2.128571 | 6.02385593 | Treponema | 157 | Bacteria | Bacteria | 168 | 4.52e-49 | NR | MEE1211719.1 | 166 | g90626 | i0 | 89.7 | 1.82332155477032 | 87 | 9 | 92.2 | 0 | 2 | 262 | 82 | 168 | MEE1211719.1 hypothetical protein [Treponema sp.] | diamond | 516 | 169 | 0.994082840236686 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30403260 | 30403260 | PRJNA879067_P_NODE_74093_length_366_cov_5.068259_g70608_i0 | PRJNA879067 | 74093 | 366 | 5.068259 | 18.54982794 | Leptospira licerasiae | 447106 | Bacteria | Bacteria | 204 | 1.4999999999999999e-58 | NR | WP_135665384.1 | 447106 | g70608 | i0 | 92.9 | 0.918032786885246 | 112 | 8 | 91.8 | 0 | 365 | 30 | 545 | 656 | WP_135665384.1 efflux RND transporter permease subunit [Leptospira licerasiae] | diamond | 336 | 204 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira licerasiae | ||
| 30442580 | 30442580 | PRJNA879067_P_NODE_57253_length_468_cov_13.668354_g53768_i0 | PRJNA879067 | 57253 | 468 | 13.668354 | 63.96789672 | Leptospira | 171 | Bacteria | Bacteria | 253 | 1.3799999999999999e-76 | NR | WP_135757370.1 | 2484904 | g53768 | i0 | 78.8 | 3.73717948717949 | 146 | 31 | 93.6 | 0 | 468 | 31 | 245 | 390 | WP_135757370.1 SpoIIE family protein phosphatase [Leptospira dzoumogneensis] | diamond | 1749 | 255 | 0.992156862745098 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira dzoumogneensis | ||
| 30687076 | 30687076 | PRJNA879067_P_NODE_93013_length_287_cov_1.869159_g89527_i0 | PRJNA879067 | 93013 | 287 | 1.869159 | 5.36448633 | Leptospira dzoumogneensis | 2484904 | Bacteria | Bacteria | 156 | 6.3e-42 | NR | WP_135755157.1 | 2484904 | g89527 | i0 | 93 | 0.898954703832753 | 86 | 6 | 89.9 | 0 | 2 | 259 | 418 | 503 | WP_135755157.1 MMPL family transporter [Leptospira dzoumogneensis] | diamond | 258 | 156 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira dzoumogneensis | ||
| 31003217 | 31003217 | PRJNA879067_P_NODE_79914_length_339_cov_2.552632_g76428_i0 | PRJNA879067 | 79914 | 339 | 2.552632 | 8.65342248 | Leptospira johnsonii | 1917820 | Bacteria | Bacteria | 182 | 3.0499999999999995e-54 | NR | GBF40215.1 | 1917820 | g76428 | i0 | 95.2 | 0.920353982300885 | 104 | 5 | 92 | 0 | 337 | 26 | 8 | 111 | GBF40215.1 putative membrane protein [Leptospira johnsonii] | diamond | 312 | 182 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira johnsonii | ||
| 31035043 | 31035043 | PRJNA879067_P_NODE_71355_length_381_cov_1.564935_g67870_i0 | PRJNA879067 | 71355 | 381 | 1.564935 | 5.96240235 | Treponema endosymbiont of Eucomonympha sp. | 1580831 | Bacteria | Bacteria | 224 | 2.39e-69 | NR | WP_202966463.1 | 1580831 | g67870 | i0 | 93.3 | 0.937007874015748 | 119 | 8 | 93.7 | 0 | 357 | 1 | 259 | 377 | WP_202966463.1 response regulator [Treponema endosymbiont of Eucomonympha sp.] | diamond | 357 | 224 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema endosymbiont of Eucomonympha sp. | ||
| 31382582 | 31382582 | PRJNA879067_P_NODE_63116_length_429_cov_1.289326_g59631_i0 | PRJNA879067 | 63116 | 429 | 1.289326 | 5.53120854 | Leptospira licerasiae | 447106 | Bacteria | Bacteria | 198 | 1.5299999999999998e-60 | NR | WP_008594126.1 | 447106 | g59631 | i0 | 94.5 | 1.52447552447552 | 109 | 6 | 76.2 | 0 | 39 | 365 | 192 | 300 | WP_008594126.1 ABC transporter permease subunit [Leptospira licerasiae] | diamond | 654 | 198 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira licerasiae | ||
| 31414152 | 31414152 | PRJNA879067_P_NODE_88716_length_303_cov_2.552174_g85230_i0 | PRJNA879067 | 88716 | 303 | 2.552174 | 7.73308722 | Leptospira neocaledonica | 2023192 | Bacteria | Bacteria | 172 | 6.219999999999999e-48 | NR | WP_100768953.1 | 2023192 | g85230 | i0 | 91.6 | 1.88118811881188 | 95 | 8 | 94.1 | 0 | 1 | 285 | 219 | 313 | WP_100768953.1 sensor histidine kinase [Leptospira neocaledonica] | diamond | 570 | 172 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira neocaledonica | ||
| 32141731 | 32141731 | PRJNA879067_P_NODE_81678_length_332_cov_1.177606_g78192_i0 | PRJNA879067 | 81678 | 332 | 1.177606 | 3.90965192 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 191 | 8.539999999999998e-55 | NR | MCI6113922.1 | 2026792 | g78192 | i0 | 90 | 0.993975903614458 | 110 | 11 | 99.4 | 0 | 331 | 2 | 395 | 504 | MCI6113922.1 response regulator [Spirochaetales bacterium] | diamond | 330 | 191 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32394926 | 32394926 | PRJNA879067_P_NODE_79079_length_343_cov_2.007407_g75593_i0 | PRJNA879067 | 79079 | 343 | 2.007407 | 6.88540601 | Brevinematia bacterium | 3121702 | Bacteria | Bacteria | 48.9 | 9.09e-5 | NR | MFN4245853.1 | 3121702 | g75593 | i0 | 58.3 | 0.524781341107872 | 60 | 21 | 52.5 | 1 | 341 | 162 | 38 | 93 | MFN4245853.1 hypothetical protein [Brevinematia bacterium] | diamond | 180 | 48.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Brevinematia | Brevinematia bacterium | |||||
| 32592667 | 32592667 | PRJNA879067_P_NODE_63919_length_423_cov_6.308571_g60434_i0 | PRJNA879067 | 63919 | 423 | 6.308571 | 26.68525533 | Leptospira | 171 | Bacteria | Bacteria | 215 | 1.02e-61 | NR | WP_135679645.1 | 2484982 | g60434 | i0 | 95.3 | 1.52482269503546 | 107 | 5 | 75.9 | 0 | 325 | 5 | 70 | 176 | WP_135679645.1 PD40 domain-containing protein [Leptospira selangorensis] | diamond | 645 | 215 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira selangorensis | ||
| 32742156 | 32742156 | PRJNA879067_P_NODE_22320_length_936_cov_4.427578_g19282_i0 | PRJNA879067 | 22320 | 936 | 4.427578 | 41.44213008 | Spirochaetes bacterium GWB1_59_5 | 1802176 | Bacteria | Bacteria | 291 | 5.29e-92 | NR | OHD25442.1 | 1802176 | g19282 | i0 | 57 | 0.826923076923077 | 258 | 109 | 82.4 | 2 | 146 | 916 | 2 | 258 | OHD25442.1 MAG: hypothetical protein A2Y38_12850 [Spirochaetes bacterium GWB1_59_5] | diamond | 774 | 291 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetes bacterium GWB1_59_5 | ||||||
| 32804919 | 32804919 | PRJNA879067_P_NODE_33260_length_711_cov_2.855799_g29893_i0 | PRJNA879067 | 33260 | 711 | 2.855799 | 20.30473089 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 318 | 2.08e-103 | NR | MBP9024482.1 | 2202144 | g29893 | i0 | 84.6 | 0.713080168776371 | 169 | 26 | 71.3 | 0 | 173 | 679 | 1 | 169 | MBP9024482.1 DDE-type integrase/transposase/recombinase [Spirochaetota bacterium] | diamond | 507 | 318 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;