RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879067" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA879067 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30434754 30434754 PRJNA879067_P_NODE_58533_length_459_cov_8.116580_g55048_i0 PRJNA879067 58533 459 8.11658 37.2551022 Hexamita inflata 28002 Fornicata other_Eukaryota 52.4 4.28e-6   NR CAK8749029.1 28002 g55048 i0 65.6 0.418300653594771 32 11 20.9 0 313 218 2 33 CAK8749029.1 HINF_088995 [Hexamita inflata] diamond 192 52.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31509165 31509165 PRJNA879067_P_NODE_53256_length_498_cov_10.190588_g49772_i0 PRJNA879067 53256 498 10.190588 50.74912824 Hexamita inflata 28002 Fornicata other_Eukaryota 51.6 1.11e-5   NR CAK8749029.1 28002 g49772 i0 65.6 0.385542168674699 32 11 19.3 0 316 221 2 33 CAK8749029.1 HINF_088995 [Hexamita inflata] diamond 192 51.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;