RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA879067" and tax_phylum = "Cercozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA879067 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14882675 14882675 PRJNA879067_P_NODE_30792_length_751_cov_1.809735_g27465_i0 PRJNA879067 30792 751 1.809735 13.59110985 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 760 0   NTclustered gi|290760486|gb|GQ144689.1| 361427 g27465 i0 85.369 74.5992010652463 745 96 98 10 1 734 1642 2384 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 56024 760 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
23808681 23808681 PRJNA879067_P_NODE_95819_length_277_cov_2.240196_g92333_i0 PRJNA879067 95819 277 2.240196 6.20534292 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 372 1.72e-98   NTclustered gi|1270185590|gb|MG266091.1| 175275 g92333 i0 93.902 88.7833935018051 246 15 89 0 32 277 301 546 Uncultured Cercozoa clone MossITSLSU918 large subunit ribosomal RNA gene, partial sequence blastn 24593 372 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;