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contig_metadata

20 rows where bioproject = "PRJNA879067", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 20 ✖

tax_kingdom 1

  • Pseudomonadati · 20 ✖

bioproject 1

  • PRJNA879067 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
855314 855314 PRJNA879067_P_NODE_48901_length_534_cov_3.032538_g45422_i0 PRJNA879067 48901 534 3.032538 16.19375292 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 150 5.81e-41   NR MFI5324066.1 2202153 g45422 i0 80 0.50561797752809 90 18 50.6 0 532 263 228 317 MFI5324066.1 thioredoxin-disulfide reductase [Thermodesulfobacteriota bacterium] diamond 270 150 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
3407404 3407404 PRJNA879067_P_NODE_99003_length_266_cov_1.502591_g95517_i0 PRJNA879067 99003 266 1.502591 3.99689206 Bacteria 2 Bacteria Bacteria 166 2.2e-46   NR MCL4244294.1 2080303 g95517 i0 90.1 3.65413533834586 81 8 91.4 0 266 24 222 302 MCL4244294.1 PQQ-dependent sugar dehydrogenase [Candidatus Dadabacteria bacterium] diamond 972 166 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
4683364 4683364 PRJNA879067_P_NODE_39904_length_624_cov_2.190563_g36459_i0 PRJNA879067 39904 624 2.190563 13.66911312 Desulfobacterales bacterium 2044940 Bacteria Bacteria 223 2.61e-69   NR MBF0120026.1 2044940 g36459 i0 52 2.91826923076923 202 95 96.2 1 25 624 45 246 MBF0120026.1 SDR family oxidoreductase [Desulfobacterales bacterium] diamond 1821 223 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
13608943 13608943 PRJNA879067_P_NODE_50951_length_517_cov_2.067568_g47468_i0 PRJNA879067 50951 517 2.067568 10.68932656 Desulfovibrio desulfuricans 876 Bacteria Bacteria 739 0   NTclustered gi|2172810686|gb|CP077745.1| 876 g47468 i0 92.486 16.2321083172147 519 36 100 3 1 517 2990258 2989741 Desulfovibrio desulfuricans strain Edelweiss chromosome, complete genome blastn 8392 739 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio desulfuricans
19980878 19980878 PRJNA879067_P_NODE_17716_length_1096_cov_6.317693_g14928_i0 PRJNA879067 17716 1096 6.317693 69.24191528 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 475 7.239999999999998e-166   NR MCC6713589.1 2080303 g14928 i0 88.8 0.736313868613139 269 30 73.6 0 60 866 30 298 MCC6713589.1 GTPase Era [Candidatus Dadabacteria bacterium] diamond 807 475 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
21256842 21256842 PRJNA879067_P_NODE_33577_length_706_cov_14.619273_g30206_i0 PRJNA879067 33577 706 14.619273 103.21206738 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 244 1.04e-77   NR MCA9809583.1 2080303 g30206 i0 90.4 0.573654390934844 135 13 57.4 0 429 25 1 135 MCA9809583.1 ABC transporter ATP-binding protein [Candidatus Dadabacteria bacterium] diamond 405 244 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
21257307 21257307 PRJNA879067_P_NODE_48837_length_534_cov_19.075922_g45358_i0 PRJNA879067 48837 534 19.075922 101.86542348 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 468 4.39e-127   NTclustered gi|2575803239|emb|OY729416.1| 2202153 g45358 i0 83.658 152.634831460674 514 66 95 13 26 534 75138 75638 MAG: Thermodesulfobacteriota bacterium isolate ba02c5ff-97d3-4768-ae28-618c4039653d genome assembly, chromosome: 1 blastn 81507 468 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
22530783 22530783 PRJNA879067_P_NODE_14078_length_1273_cov_7.803333_g11542_i0 PRJNA879067 14078 1273 7.803333 99.33642909 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 800 6.6e-288   NR MCC6713144.1 2080303 g11542 i0 94.3 0.996857816182247 423 24 99.7 0 1273 5 39 461 MCC6713144.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG [Candidatus Dadabacteria bacterium] diamond 1269 800 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
25081769 25081769 PRJNA879067_P_NODE_65380_length_414_cov_3.645161_g61895_i0 PRJNA879067 65380 414 3.645161 15.09096654 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 263 5.150000000000001e-86   NR MCL4246093.1 2080303 g61895 i0 95.6 1.98550724637681 137 6 99.3 0 3 413 2 138 MCL4246093.1 phosphoribosylformylglycinamidine cyclo-ligase [Candidatus Dadabacteria bacterium] diamond 822 263 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
26643609 26643609 PRJNA879067_P_NODE_6821_length_1928_cov_16.364960_g5133_i0 PRJNA879067 6821 1928 16.36496 315.51642880000003 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 773 8.31e-271   NR HML96064.1 2202153 g5133 i0 93.1 0.676867219917012 435 30 67.7 0 30 1334 387 821 HML96064.1 DNA gyrase subunit A [Thermodesulfobacteriota bacterium] diamond 1305 773 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
26706793 26706793 PRJNA879067_P_NODE_71241_length_381_cov_4.646104_g67756_i0 PRJNA879067 71241 381 4.646104 17.70165624 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 144 2.1399999999999996e-41   NR HML95674.1 2202153 g67756 i0 82.9 0.645669291338583 82 14 64.6 0 380 135 80 161 HML95674.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 246 144 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27276636 27276636 PRJNA879067_P_NODE_17703_length_1096_cov_18.576735_g14917_i0 PRJNA879067 17703 1096 18.576735 203.6010156 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 444 4.39e-154   NR MEZ4548516.1 2202153 g14917 i0 82.7 0.695255474452555 254 44 69.5 0 764 3 19 272 MEZ4548516.1 cyclase family protein [Thermodesulfobacteriota bacterium] diamond 762 444 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27663700 27663700 PRJNA879067_P_NODE_27744_length_808_cov_2.400000_g24494_i0 PRJNA879067 27744 808 2.4 19.392 Pseudomonadati 3379134 Bacteria Bacteria 245 2.62e-77   NR OQX22780.1 1934248 g24494 i0 49.8 4.59282178217822 255 123 93.2 2 763 11 2 255 OQX22780.1 MAG: hypothetical protein BWK80_29385 [Desulfobacteraceae bacterium IS3] diamond 3711 246 0.995934959349594 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium IS3
29297365 29297365 PRJNA879067_P_NODE_102989_length_251_cov_1.297753_g99503_i0 PRJNA879067 102989 251 1.297753 3.25736003 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 134 6.65e-39   NR MCC6713473.1 2080303 g99503 i0 97.1 0.812749003984064 68 2 81.3 0 3 206 28 95 MCC6713473.1 co-chaperone GroES [Candidatus Dadabacteria bacterium] diamond 204 134 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
29644272 29644272 PRJNA879067_P_NODE_36850_length_661_cov_3.959184_g33431_i0 PRJNA879067 36850 661 3.959184 26.17020624 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 245 3.9000000000000005e-80   NR MCC6713440.1 2080303 g33431 i0 93.1 0.590015128593041 130 9 59 0 401 12 1 130 MCC6713440.1 30S ribosomal protein S9 [Candidatus Dadabacteria bacterium] diamond 390 245 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
30213102 30213102 PRJNA879067_P_NODE_108152_length_244_cov_2.701754_g104666_i0 PRJNA879067 108152 244 2.701754 6.59227976 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 138 1.05e-39   NR MCL4244700.1 2080303 g104666 i0 87.5 1.9672131147541 80 10 98.4 0 242 3 30 109 MCL4244700.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 480 138 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
30403255 30403255 PRJNA879067_P_NODE_54733_length_487_cov_2.898551_g51248_i0 PRJNA879067 54733 487 2.898551 14.11594337 Geobacteraceae bacterium 2282154 Bacteria Bacteria 73.2 9.74e-13   NR HTP66667.1 2282154 g51248 i0 34.4 0.788501026694045 128 81 78.9 2 485 102 13 137 HTP66667.1 ACT domain-containing protein [Geobacteraceae bacterium] diamond 384 73.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
30497692 30497692 PRJNA879067_P_NODE_77493_length_350_cov_1.960289_g74007_i0 PRJNA879067 77493 350 1.960289 6.8610115 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 125 9.71e-34   NR MCL4244011.1 2080303 g74007 i0 86.7 0.642857142857143 75 10 64.3 0 80 304 1 75 MCL4244011.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 225 125 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
31793431 31793431 PRJNA879067_P_NODE_58677_length_458_cov_6.322078_g55192_i0 PRJNA879067 58677 458 6.322078 28.95511724 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 238 1.75e-75   NR MCL4244852.1 2080303 g55192 i0 84.7 0.897379912663755 137 21 89.7 0 24 434 188 324 MCL4244852.1 hypothetical protein [Candidatus Dadabacteria bacterium] diamond 411 238 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
31825105 31825105 PRJNA879067_P_NODE_19617_length_1022_cov_10.813488_g16714_i0 PRJNA879067 19617 1022 10.813488 110.51384736 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 597 1.4799999999999999e-204   NR HML95316.1 2202153 g16714 i0 92.2 1.96086105675147 334 25 97.7 1 24 1022 146 479 HML95316.1 MXAN_5808 family serine peptidase [Thermodesulfobacteriota bacterium] diamond 2004 597 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;