RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879067", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA879067 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17434769 17434769 PRJNA879067_P_NODE_98954_length_266_cov_1.595855_g95468_i0 PRJNA879067 98954 266 1.595855 4.2449743 Ptychodera flava 63121 Hemichordata other_Eukaryota 150 9.44e-40   NR XP_070553496.1 63121 g95468 i0 77.5 2.97744360902256 89 19 99.2 1 1 264 25 113 XP_070553496.1 leucine--tRNA ligase, cytoplasmic-like [Ptychodera flava] diamond 792 150 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
29021592 29021592 PRJNA879067_P_NODE_38968_length_635_cov_5.008897_g35529_i0 PRJNA879067 38968 635 5.008897 31.80649595 Metazoa 33208 Hemichordata other_Eukaryota 315 3.35e-102   NR XP_070531707.1 63121 g35529 i0 75.4 10.9653543307087 211 52 99.7 0 633 1 290 500 XP_070531707.1 T-complex protein 1 subunit beta-like [Ptychodera flava] diamond 6963 317 0.993690851735016 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;