RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA879067", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 8 ✖

tax_kingdom 1

  • Metazoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA879067 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2129358 2129358 PRJNA879067_P_NODE_13802_length_1288_cov_34.427160_g11287_i0 PRJNA879067 13802 1288 34.42716 443.4218208 Helobdella robusta 6412 Annelida Annelida 54.7 0.037   NTclustered gi|675850973|ref|XM_009012799.1| 6412 g11287 i0 85.455 0.0427018633540373 55 4 4 4 623 675 1960 2012 Helobdella robusta hypothetical protein mRNA blastn 55 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
3405570 3405570 PRJNA879067_P_NODE_34243_length_697_cov_10.309295_g30862_i0 PRJNA879067 34243 697 10.309295 71.85578615 Hirudo verbana 311461 Annelida Annelida 54.7 0.019   NTclustered gi|2918369693|emb|OZ237785.1| 311461 g30862 i0 96.875 0.0459110473457676 32 1 5 0 134 165 967029 966998 Hirudo verbana genome assembly, chromosome: 7 blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
5067170 5067170 PRJNA879067_P_NODE_62884_length_430_cov_3.408964_g59399_i0 PRJNA879067 62884 430 3.408964 14.6585452 Metazoa 33208 Annelida Annelida 52.8 0.041   NTclustered gi|2920003636|emb|OZ238874.1| 1046305 g59399 i0 100 0.130232558139535 28 0 7 0 236 263 4772008 4772035 Ailoscolex lacteospumosus genome assembly, chromosome: 15 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
16156950 16156950 PRJNA879067_P_NODE_19153_length_1038_cov_21.793782_g16276_i0 PRJNA879067 19153 1038 21.793782 226.21945716 Hirudo verbana 311461 Annelida Annelida 60.2 6.3e-4   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g16276 i0 100 0.219653179190751 32 0 3 0 602 633 7877415 7877446 Hirudo verbana genome assembly, chromosome: 12 blastn 228 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
22531632 22531632 PRJNA879067_P_NODE_37058_length_658_cov_12.478632_g33638_i0 PRJNA879067 37058 658 12.478632 82.10939856 Ailoscolex lacteospumosus 1046305 Annelida Annelida 54.7 0.018   NTclustered gi|2920003608|emb|OZ238872.1| 1046305 g33638 i0 100 0.088145896656535 29 0 4 0 466 494 17507897 17507925 Ailoscolex lacteospumosus genome assembly, chromosome: 13 blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
25080183 25080183 PRJNA879067_P_NODE_15540_length_1198_cov_6.509333_g12878_i0 PRJNA879067 15540 1198 6.509333 77.98180934 Hirudo verbana 311461 Annelida Annelida 62.1 2.03e-4   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g12878 i0 85.075 0.743739565943239 67 3 6 6 218 282 220375 220314 Hirudo verbana genome assembly, chromosome: 12 blastn 891 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
25081239 25081239 PRJNA879067_P_NODE_46740_length_553_cov_4.689583_g43270_i0 PRJNA879067 46740 553 4.689583 25.93339399 Hirudo verbana 311461 Annelida Annelida 63.9 2.51e-5   NTclustered gi|2918369706|emb|OZ237788.1| 311461 g43270 i0 75.54 6.45750452079566 139 28 25 4 272 409 8903406 8903539 Hirudo verbana genome assembly, chromosome: 10 blastn 3571 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
31675032 31675032 PRJNA879067_P_NODE_102737_length_252_cov_1.290503_g99251_i0 PRJNA879067 102737 252 1.290503 3.25206756 root 1 Root_unresolved Root_unresolved 119 7.29e-33   NR CAH1780514.1 6347 g99251 i0 64.3 6.95238095238095 84 30 100 0 252 1 13 96 CAH1780514.1 unnamed protein product [Owenia fusiformis] diamond 1752 119 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;