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contig_metadata

23 rows where bioproject = "PRJNA879067" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 23 ✖

bioproject 1

  • PRJNA879067 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
854637 854637 PRJNA879067_P_NODE_28121_length_800_cov_3.103164_g24862_i0 PRJNA879067 28121 800 3.103164 24.825312 Eukaryota 2759 Plants Plants 246 1.47e-77   NR XP_042918233.1 3055 g24862 i0 55.8 43.99125 224 96 83.3 2 120 785 34 256 XP_042918233.1 uncharacterized protein CHLRE_12g504150v5 [Chlamydomonas reinhardtii] diamond 35193 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
3406474 3406474 PRJNA879067_P_NODE_62483_length_433_cov_1.641667_g58998_i0 PRJNA879067 62483 433 1.641667 7.10841811 Chlorella vulgaris 3077 Plants Plants 157 2.71e-47   NR KAI3425906.1 3077 g58998 i0 88.1 2.30715935334873 84 10 58.2 0 73 324 1 84 KAI3425906.1 hypothetical protein D9Q98_007878 [Chlorella vulgaris] diamond 999 157 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
6342987 6342987 PRJNA879067_P_NODE_42745_length_593_cov_2.215385_g39286_i0 PRJNA879067 42745 593 2.215385 13.13723305 Coccomyxa 41891 Plants Plants 645 2.1199999999999998e-180   NTclustered gi|1601875646|gb|MK694759.1| 2315456 g39286 i0 87.434 89.9814502529511 565 65 95 5 6 567 3894 4455 Coccomyxa sp. Obi small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 53359 645 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
8509173 8509173 PRJNA879067_P_NODE_85847_length_314_cov_4.850622_g82361_i0 PRJNA879067 85847 314 4.850622 15.23095308 Chlorella variabilis 554065 Plants Plants 58.2 1.12e-8   NR XP_005844836.1 554065 g82361 i0 40 1.24203821656051 70 41 66.9 1 73 282 8 76 XP_005844836.1 hypothetical protein CHLNCDRAFT_48298 [Chlorella variabilis] diamond 390 58.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
10167923 10167923 PRJNA879067_P_NODE_91748_length_292_cov_1.273973_g88262_i0 PRJNA879067 91748 292 1.273973 3.72000116 Chlorophyta 3041 Plants Plants 508 1.34e-139   NTclustered gi|1669402958|gb|MK975490.1| 77546 g88262 i0 100 94.777397260274 275 0 94 0 1 275 567 293 Scenedesmus vacuolatus strain SAG 211-8e 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27675 508 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus vacuolatus
13608184 13608184 PRJNA879067_P_NODE_26791_length_827_cov_34.807692_g23564_i0 PRJNA879067 26791 827 34.807692 287.85961284 Eukaryota 2759 Plants Plants 284 2.56e-93   NR XP_005649875.1 574566 g23564 i0 62.4 14.5284159613059 221 78 80.2 1 77 739 1 216 XP_005649875.1 60S ribosomal protein L10a [Coccomyxa subellipsoidea C-169] diamond 12015 284 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
13609923 13609923 PRJNA879067_P_NODE_87051_length_310_cov_1.299578_g83565_i0 PRJNA879067 87051 310 1.299578 4.0286918 Myrmecia sp. (in: green algae) 2897817 Plants Plants 529 1.0999999999999996e-145   NTclustered gi|2644500051|gb|PP079689.1| 2897817 g83565 i0 100 92.6709677419355 286 0 92 0 25 310 662 947 Myrmecia sp. (in: green algae) isolate C4 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28728 529 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia sp. (in: green algae)
14883465 14883465 PRJNA879067_P_NODE_56332_length_475_cov_2.773632_g52847_i0 PRJNA879067 56332 475 2.773632 13.174752 [Myrmecia] bisecta 41462 Plants Plants 68.6 4.21e-10   NR KAK9815742.1 41462 g52847 i0 61.9 1.06105263157895 84 25 53.1 1 30 281 605 681 KAK9815742.1 hypothetical protein WJX72_008803 [[Myrmecia] bisecta] diamond 504 68.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
17434324 17434324 PRJNA879067_P_NODE_81454_length_333_cov_1.080769_g77968_i0 PRJNA879067 81454 333 1.080769 3.59896077 Lobosphaera incisa 312850 Plants Plants 544 4.25e-150   NTclustered gi|725539263|gb|KM821265.1| 312850 g77968 i0 99.01 31.1201201201201 303 3 91 0 1 303 138416 138718 Lobosphaera incisa chloroplast, complete genome blastn 10363 544 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Lobosphaera Lobosphaera incisa
20365411 20365411 PRJNA879067_P_NODE_55996_length_478_cov_1.649383_g52511_i0 PRJNA879067 55996 478 1.649383 7.88405074 Chlorellales 35460 Plants Plants 459 2.35e-124   NTclustered gi|1360638129|gb|AC277064.1| 574566 g52511 i0 84.232 100.864016736402 482 64 100 11 1 478 2607 3080 Coccomyxa subellipsoidea C-169 clone FAHX137-B20, complete sequence blastn 48213 459 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
22532547 22532547 PRJNA879067_P_NODE_68158_length_398_cov_2.963077_g64673_i0 PRJNA879067 68158 398 2.963077 11.79304646 Chlorophyta 3041 Plants Plants 141 9.039999999999999e-41   NR KAK9812718.1 41462 g64673 i0 79.2 5.05778894472362 96 20 72.4 0 396 109 8 103 KAK9812718.1 hypothetical protein WJX72_002574 [[Myrmecia] bisecta] diamond 2013 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
25080312 25080312 PRJNA879067_P_NODE_18940_length_1047_cov_3.573922_g16076_i0 PRJNA879067 18940 1047 3.573922 37.41896334 Eukaryota 2759 Plants Plants 407 2.5299999999999995e-138   NR KAK2078053.1 3111 g16076 i0 62.1 27.1547277936963 319 121 91.4 0 69 1025 21 339 KAK2078053.1 hypothetical protein QBZ16_003921 [Prototheca wickerhamii] diamond 28431 407 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
25466047 25466047 PRJNA879067_P_NODE_91920_length_291_cov_1.766055_g88434_i0 PRJNA879067 91920 291 1.766055 5.13922005 Bryopsis sp. KO-2 3115439 Plants Plants 102 9.84e-23   NR GMH34252.1 3041901 g88434 i0 60.4 1.85567010309278 91 35 93.8 1 19 291 568 657 GMH34252.1 hypothetical protein BSKO_02086 [Bryopsis sp. KO-2023] diamond 540 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
27189609 27189609 PRJNA879067_P_NODE_78482_length_345_cov_3.680147_g74996_i0 PRJNA879067 78482 345 3.680147 12.69650715 Chlorophyta 3041 Plants Plants 94.7 1.23e-22   NR PRW56617.1 3076 g74996 i0 53.8 5.82608695652174 93 43 80.9 0 23 301 3 95 PRW56617.1 60S ribosomal L36-3-like [Chlorella sorokiniana] diamond 2010 95.1 0.995793901156677 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
27687471 27687471 PRJNA879067_P_NODE_105544_length_248_cov_0.880000_g102058_i0 PRJNA879067 105544 248 0.88 2.1824 Chlorella sorokiniana 3076 Plants Plants 148 5.2099999999999996e-42   NR PRW20400.1 3076 g102058 i0 85.6 1.08870967741935 90 5 99.2 1 247 2 200 289 PRW20400.1 60S ribosomal L5 [Chlorella sorokiniana] diamond 270 148 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28105458 28105458 PRJNA879067_P_NODE_7125_length_1881_cov_17.308628_g5392_i0 PRJNA879067 7125 1881 17.308628 325.57529268 Chlorophyta 3041 Plants Plants 707 1.5699999999999996e-248   NR AGK38423.1 3074 g5392 i0 62.8 14.5055821371611 564 204 89 3 1769 96 43 606 AGK38423.1 CYP97B1 [Parachlorella kessleri] diamond 27285 707 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
28602855 28602855 PRJNA879067_P_NODE_112347_length_163_cov_2.593220_g108861_i0 PRJNA879067 112347 163 2.59322 4.2269486 Chlorella vulgaris 3077 Plants Plants 53.5 3.71e-7   NR KAI3438845.1 3077 g108861 i0 58.3 1.74846625766871 48 18 84.7 2 140 3 69 116 KAI3438845.1 hypothetical protein D9Q98_001262 [Chlorella vulgaris] diamond 285 53.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
28760512 28760512 PRJNA879067_P_NODE_61067_length_442_cov_6.241192_g57582_i0 PRJNA879067 61067 442 6.241192 27.58606864 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 209 6.3e-66   NR KAG7671280.1 1650286 g57582 i0 74.4 4.39819004524887 129 31 87.6 1 422 36 72 198 KAG7671280.1 hypothetical protein KSW81_003418 [Chlorella desiccata (nom. nud.)] diamond 1944 209 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
28855156 28855156 PRJNA879067_P_NODE_30248_length_760_cov_5.017467_g26935_i0 PRJNA879067 30248 760 5.017467 38.1327492 Edaphochlamys debaryana 47281 Plants Plants 103 2.4e-21   NR KAG2482798.1 47281 g26935 i0 34.5 0.868421052631579 220 119 82.9 5 10 639 41 245 KAG2482798.1 hypothetical protein HYH03_018288 [Edaphochlamys debaryana] diamond 660 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
28950296 28950296 PRJNA879067_P_NODE_32488_length_723_cov_5.635385_g29129_i0 PRJNA879067 32488 723 5.635385 40.74383355 [Myrmecia] bisecta 41462 Plants Plants 58.5 7.28e-6   NR KAK9808923.1 41462 g29129 i0 40.8 0.294605809128631 71 34 29.5 3 417 629 82 144 KAK9808923.1 hypothetical protein WJX72_006468 [[Myrmecia] bisecta] diamond 213 58.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
30253090 30253090 PRJNA879067_P_NODE_85932_length_314_cov_1.991701_g82446_i0 PRJNA879067 85932 314 1.991701 6.25394114 Eukaryota 2759 Plants Plants 54.7 5.01e-6   NR KAK2077919.1 3111 g82446 i0 42.1 7.17515923566879 76 43 71.7 1 2 226 290 365 KAK2077919.1 hypothetical protein QBZ16_003787 [Prototheca wickerhamii] diamond 2253 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
30758445 30758445 PRJNA879067_P_NODE_53034_length_500_cov_2.988290_g49550_i0 PRJNA879067 53034 500 2.98829 14.94145 Chlorophyta 3041 Plants Plants 55.5 8.79e-7   NR KAI8466984.1 39955 g49550 i0 40.6 1.134 64 38 38.4 0 499 308 23 86 KAI8466984.1 MAG: hypothetical protein J3K34DRAFT_432083 [Monoraphidium minutum] diamond 567 55.8 0.99462365591397806 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
31856836 31856836 PRJNA879067_P_NODE_40757_length_614_cov_6.256932_g37307_i0 PRJNA879067 40757 614 6.256932 38.41756248 Trebouxia sp. C 2796353 Plants Plants 99.4 1.45e-20   NR KAL0036642.1 2905654 g37307 i0 47.1 0.50814332247557 104 46 46.4 2 2 286 301 404 KAL0036642.1 hypothetical protein WJX79_003782 [Trebouxia sp. C0005] diamond 312 99.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0005

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;