RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA879067", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA879067 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7234207 7234207 PRJNA879067_P_NODE_75826_length_358_cov_1.382456_g72340_i0 PRJNA879067 75826 358 1.382456 4.94919248 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|915146690|ref|XM_013483029.1| 5804 g72340 i0 100 1.72625698324022 30 0 8 0 25 54 278 249 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 618 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
8509422 8509422 PRJNA879067_P_NODE_95507_length_278_cov_2.439024_g92021_i0 PRJNA879067 95507 278 2.439024 6.78048672 Anthozoaphila gnarlus 2783686 SAR_Eukaryotes SAR_Eukaryotes 65.8 3.29e-6   NTclustered gi|2887160899|gb|PQ872234.1| 2783686 g92021 i0 97.368 19.3345323741007 38 1 14 0 2 39 1582 1619 Anthozoaphila gnarlus isolate GZ20 large subunit ribosomal RNA gene, partial sequence blastn 5375 65.8 1 Eukaryota Sar   Apicomplexa Conoidasida Corallicolida Corallicolidae Anthozoaphila Anthozoaphila gnarlus
11058609 11058609 PRJNA879067_P_NODE_37529_length_653_cov_1.900000_g34106_i0 PRJNA879067 37529 653 1.9 12.407 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 676 0   NTclustered gi|209883104|ref|XM_002142938.1| 441375 g34106 i0 87.759 0.888208269525268 580 70 89 1 74 653 1421 843 Cryptosporidium muris RN66 uncharacterized protein (CMU_004200), partial mRNA blastn 580 676 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
12334364 12334364 PRJNA879067_P_NODE_49190_length_531_cov_8.934498_g45711_i0 PRJNA879067 49190 531 8.934498 47.44218438 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.014   NTclustered gi|1027956088|ref|XM_739250.2| 31271 g45711 i0 94.286 0.0659133709981168 35 2 7 0 438 472 2486 2452 Plasmodium chabaudi chabaudi chromatin assembly factor 1 subunit A, putative (PCHAS_1101300), partial mRNA blastn 35 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
21256384 21256384 PRJNA879067_P_NODE_21297_length_969_cov_2.272321_g18311_i0 PRJNA879067 21297 969 2.272321 22.01879049 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 79 1.16e-12   NR XP_028872325.1 462227 g18311 i0 40.3 0.947368421052632 119 44 35.3 4 674 333 60 156 XP_028872325.1 uncharacterized protein BXIN_0643 [Babesia sp. Xinjiang] diamond 918 79 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
23808154 23808154 PRJNA879067_P_NODE_75439_length_360_cov_1.341463_g71953_i0 PRJNA879067 75439 360 1.341463 4.8292668 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.034   NTclustered gi|66876413|gb|DQ054838.1| 73239 g71953 i0 94.286 0.0972222222222222 35 1 10 1 324 358 2237 2270 Plasmodium yoelii yoelii isolate 17XNL chromosome 5 putative centromere genomic sequence blastn 35 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
25081180 25081180 PRJNA879067_P_NODE_44720_length_573_cov_1.216000_g41258_i0 PRJNA879067 44720 573 1.216 6.96768 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.016   NTclustered gi|916508717|ref|XM_013499133.1| 44415 g41258 i0 100 0.0506108202443281 29 0 5 0 256 284 311 283 Eimeria mitis uncharacterized protein (EMH_0071710), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;