RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879067", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA879067 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27687472 27687472 PRJNA879067_P_NODE_107664_length_245_cov_0.895349_g104178_i0 PRJNA879067 107664 245 0.895349 2.19360505 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 168 2.56e-51   NR MBQ3097537.1 2212473 g104178 i0 97.5 0.991836734693878 81 2 99.2 0 3 245 29 109 MBQ3097537.1 HipA domain-containing protein [Kiritimatiellia bacterium] diamond 243 168 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29620688 29620688 PRJNA879067_P_NODE_104850_length_249_cov_0.875000_g101364_i0 PRJNA879067 104850 249 0.875 2.17875 Candidatus Colisoma 3082832 Bacteria Bacteria 139 6.249999999999999e-37   NR MBR2487490.1 2212473 g101364 i0 81.9 3 83 15 100 0 249 1 32 114 MBR2487490.1 [FeFe] hydrogenase H-cluster radical SAM maturase HydG [Kiritimatiellia bacterium] diamond 747 140 0.992857142857143 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;