contig_metadata
4 rows where bioproject = "PRJNA879067", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9783056 | 9783056 | PRJNA879067_P_NODE_46428_length_556_cov_3.507246_g42958_i0 | PRJNA879067 | 46428 | 556 | 3.507246 | 19.50028776 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 660 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g42958 | i0 | 89.225 | 170.232014388489 | 529 | 56 | 95 | 1 | 1 | 529 | 654106 | 653579 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 94649 | 660 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 11059430 | 11059430 | PRJNA879067_P_NODE_67429_length_402_cov_3.066869_g63944_i0 | PRJNA879067 | 67429 | 402 | 3.066869 | 12.32881338 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 580 | 3.9799999999999985e-161 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g63944 | i0 | 94.879 | 103.616915422886 | 371 | 19 | 92 | 0 | 1 | 371 | 1250086 | 1249716 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 41654 | 580 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 28760507 | 28760507 | PRJNA879067_P_NODE_20327_length_998_cov_24.917838_g17389_i0 | PRJNA879067 | 20327 | 998 | 24.917838 | 248.68002324 | Parachlamydia sp. | 2052048 | Bacteria | Bacteria | 143 | 2.03e-38 | NR | MCE5317948.1 | 2052048 | g17389 | i0 | 61.6 | 0.592184368737475 | 99 | 38 | 29.8 | 0 | 20 | 316 | 38 | 136 | MCE5317948.1 type II toxin-antitoxin system VapC family toxin [Parachlamydia sp.] | diamond | 591 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia sp. | |
| 29108022 | 29108022 | PRJNA879067_P_NODE_70008_length_388_cov_2.200000_g66523_i0 | PRJNA879067 | 70008 | 388 | 2.2 | 8.536 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 232 | 1.28e-74 | NR | HUD01560.1 | 2047756 | g66523 | i0 | 82.9 | 0.997422680412371 | 129 | 22 | 99.7 | 0 | 2 | 388 | 14 | 142 | HUD01560.1 BPL-N domain-containing protein [Rhabdochlamydiaceae bacterium] | diamond | 387 | 232 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;