RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879067", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA879067 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31003195 31003195 PRJNA879067_P_NODE_101174_length_258_cov_1.421622_g97688_i0 PRJNA879067 101174 258 1.421622 3.66778476 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 45.8 0.00344   NR MDO8729646.1 2035772 g97688 i0 43.3 0.697674418604651 60 27 68.6 3 82 258 165 218 MDO8729646.1 fatty acid desaturase [Candidatus Omnitrophota bacterium] diamond 180 45.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31382594 31382594 PRJNA879067_P_NODE_98816_length_267_cov_1.190722_g95330_i0 PRJNA879067 98816 267 1.190722 3.17922774 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 69.7 1.81e-12   NR MFA7001876.1 2035772 g95330 i0 45.7 0.910112359550562 81 36 91 1 21 263 20 92 MFA7001876.1 rhodanese-like domain-containing protein [Candidatus Omnitrophota bacterium] diamond 243 69.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;