RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA879067", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 3

tax_superkingdom 1

  • Eukaryota · 5 ✖

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA879067 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17432493 17432493 PRJNA879067_P_NODE_20454_length_994_cov_18.550489_g17511_i0 PRJNA879067 20454 994 18.550489 184.39186066 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 293 2e-86   NR KAJ5072076.1 1746090 g17511 i0 46.7 0.974849094567404 323 171 97.2 1 28 993 948 1270 KAJ5072076.1 alpha-actinin-2 [Anaeramoeba ignava] diamond 969 293 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
27655733 27655733 PRJNA879067_P_NODE_78764_length_344_cov_2.830258_g75278_i0 PRJNA879067 78764 344 2.830258 9.73608752 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 65.9 8.91e-10   NR XP_068364284.1 1144522 g75278 i0 50.8 0.549418604651163 63 31 54.9 0 194 6 10 72 XP_068364284.1 CAMK family protein kinase [Tritrichomonas foetus] diamond 189 65.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30434754 30434754 PRJNA879067_P_NODE_58533_length_459_cov_8.116580_g55048_i0 PRJNA879067 58533 459 8.11658 37.2551022 Hexamita inflata 28002 Fornicata other_Eukaryota 52.4 4.28e-6   NR CAK8749029.1 28002 g55048 i0 65.6 0.418300653594771 32 11 20.9 0 313 218 2 33 CAK8749029.1 HINF_088995 [Hexamita inflata] diamond 192 52.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31224138 31224138 PRJNA879067_P_NODE_55275_length_483_cov_2.524390_g51790_i0 PRJNA879067 55275 483 2.52439 12.1928037 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 116 8.360000000000001e-27   NR KAJ4462029.1 342808 g51790 i0 43 1.74534161490683 135 76 83.9 1 45 449 394 527 KAJ4462029.1 putative protein NRDE2 [Paratrimastix pyriformis] diamond 843 116 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31509165 31509165 PRJNA879067_P_NODE_53256_length_498_cov_10.190588_g49772_i0 PRJNA879067 53256 498 10.190588 50.74912824 Hexamita inflata 28002 Fornicata other_Eukaryota 51.6 1.11e-5   NR CAK8749029.1 28002 g49772 i0 65.6 0.385542168674699 32 11 19.3 0 316 221 2 33 CAK8749029.1 HINF_088995 [Hexamita inflata] diamond 192 51.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;