RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA879067", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA879067 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23808240 23808240 PRJNA879067_P_NODE_78999_length_343_cov_2.903704_g75513_i0 PRJNA879067 78999 343 2.903704 9.95970472 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 215 3.91e-51   NTclustered gi|1869359902|gb|CP058732.1| 2447898 g75513 i0 82.54 89.7725947521866 252 37 72 6 68 313 420579 420329 MAG: Candidatus Kapaibacterium sp. isolate Ch6 chromosome, complete genome blastn 30792 215 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28192046 28192046 PRJNA879067_P_NODE_81246_length_333_cov_3.461538_g77760_i0 PRJNA879067 81246 333 3.461538 11.52692154 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 55.5 2.73e-6   NR MCX6146970.1 2447898 g77760 i0 30.8 0.936936936936937 104 59 84.7 3 32 313 170 270 MCX6146970.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 312 55.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;