RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA879067", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA879067 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4684909 4684909 PRJNA879067_P_NODE_95904_length_277_cov_1.509804_g92418_i0 PRJNA879067 95904 277 1.509804 4.18215708 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 138 2.07e-36   NR RAL56118.1 1914866 g92418 i0 90.3 0.779783393501805 72 7 78 0 29 244 1 72 RAL56118.1 hypothetical protein BLM37_01115 [Candidatus Gracilibacteria bacterium GN02-873] diamond 216 138 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
19982108 19982108 PRJNA879067_P_NODE_54796_length_486_cov_9.038741_g51311_i0 PRJNA879067 54796 486 9.038741 43.92828126 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 246 1.46e-76   NR RKW23805.1 2044595 g51311 i0 86.1 0.932098765432099 151 21 93.2 0 455 3 19 169 RKW23805.1 MAG: hypothetical protein D8B46_02710 [Candidatus Altimarinota bacterium] diamond 453 246 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
25081254 25081254 PRJNA879067_P_NODE_47300_length_548_cov_5.705263_g43826_i0 PRJNA879067 47300 548 5.705263 31.26484124 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 754 0   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g43826 i0 93.037 0.943430656934307 517 35 94 1 32 548 180442 179927 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 517 754 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
29423454 29423454 PRJNA879067_P_NODE_91209_length_294_cov_1.081448_g87723_i0 PRJNA879067 91209 294 1.081448 3.17945712 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 94.4 5.14e-20   NR MBX9808866.1 2044595 g87723 i0 80 0.561224489795918 55 11 56.1 0 20 184 341 395 MBX9808866.1 DUF11 domain-containing protein [Candidatus Altimarinota bacterium] diamond 165 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;