contig_metadata
21 rows where bioproject = "PRJNA876641" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9781072 | 9781072 | PRJNA876641_P_NODE_20668_length_244_cov_2.485380_g20594_i0 | PRJNA876641 | 20668 | 244 | 2.48538 | 6.0643272 | Bacteria | 2 | Bacteria | Bacteria | 112 | 7.2099999999999985e-28 | NR | MEK6230939.1 | 1962973 | g20594 | i0 | 60.3 | 4.70901639344262 | 78 | 31 | 95.9 | 0 | 235 | 2 | 1 | 78 | MEK6230939.1 NAD(P)-dependent alcohol dehydrogenase [Luteolibacter sp.] | diamond | 1149 | 113 | 0.991150442477876 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 17431450 | 17431450 | PRJNA876641_P_NODE_3114_length_416_cov_0.880466_g3040_i0 | PRJNA876641 | 3114 | 416 | 0.880466 | 3.66273856 | Candidatus Methylacidiphilales bacterium | 2720631 | Bacteria | Bacteria | 195 | 2.27e-57 | NR | HSI86689.1 | 2720631 | g3040 | i0 | 70.3 | 6.95913461538461 | 138 | 41 | 99.5 | 0 | 2 | 415 | 191 | 328 | HSI86689.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Candidatus Methylacidiphilales bacterium] | diamond | 2895 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Candidatus Methylacidiphilales bacterium | |||
| 22916138 | 22916138 | PRJNA876641_P_NODE_18398_length_248_cov_0.880000_g18324_i0 | PRJNA876641 | 18398 | 248 | 0.88 | 2.1824 | Coraliomargarita | 442430 | Bacteria | Bacteria | 244 | 3.45e-60 | NTclustered | gi|470486190|ref|NR_076741.1| | 395922 | g18324 | i0 | 85.714 | 229.112903225806 | 238 | 26 | 95 | 6 | 3 | 237 | 1776 | 1544 | Coraliomargarita akajimensis strain 04OKA010-24 23S ribosomal RNA gene, complete sequence | blastn | 56820 | 244 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita akajimensis | |
| 25465178 | 25465178 | PRJNA876641_P_NODE_3740_length_389_cov_1.439873_g3666_i0 | PRJNA876641 | 3740 | 389 | 1.439873 | 5.60110597 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 66.2 | 9.3e-10 | NR | RYD71398.1 | 2026800 | g3666 | i0 | 34.3 | 1.34190231362468 | 102 | 66 | 78.7 | 1 | 81 | 386 | 14 | 114 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 522 | 66.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 26770412 | 26770412 | PRJNA876641_P_NODE_21121_length_244_cov_0.900585_g21047_i0 | PRJNA876641 | 21121 | 244 | 0.900585 | 2.1974274 | Pelagicoccus mobilis | 415221 | Bacteria | Bacteria | 62.4 | 4.48e-9 | NR | WP_200358271.1 | 415221 | g21047 | i0 | 44.4 | 0.885245901639344 | 72 | 36 | 86.1 | 3 | 217 | 8 | 420 | 489 | WP_200358271.1 arylsulfatase [Pelagicoccus mobilis] | diamond | 216 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Pelagicoccaceae | Pelagicoccus | Pelagicoccus mobilis | |
| 27276610 | 27276610 | PRJNA876641_P_NODE_2863_length_428_cov_2.563380_g2789_i0 | PRJNA876641 | 2863 | 428 | 2.56338 | 10.9712664 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 129 | 4.03e-33 | NR | RYD71398.1 | 2026800 | g2789 | i0 | 55 | 0.841121495327103 | 120 | 53 | 83.4 | 1 | 3 | 359 | 242 | 361 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 360 | 129 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27276617 | 27276617 | PRJNA876641_P_NODE_963_length_655_cov_2.962199_g892_i0 | PRJNA876641 | 963 | 655 | 2.962199 | 19.40240345 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 209 | 5.699999999999999e-63 | NR | MDH4476108.1 | 2026800 | g892 | i0 | 62.7 | 2.28091603053435 | 166 | 61 | 76 | 1 | 655 | 158 | 191 | 355 | MDH4476108.1 alkene reductase [Verrucomicrobiaceae bacterium] | diamond | 1494 | 209 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28065916 | 28065916 | PRJNA876641_P_NODE_11925_length_271_cov_1.333333_g11851_i0 | PRJNA876641 | 11925 | 271 | 1.333333 | 3.61333243 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 107 | 1.49e-25 | NR | HTG45312.1 | 2499141 | g11851 | i0 | 60 | 0.940959409594096 | 85 | 34 | 94.1 | 0 | 17 | 271 | 13 | 97 | HTG45312.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 255 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28065930 | 28065930 | PRJNA876641_P_NODE_24045_length_229_cov_2.378205_g23971_i0 | PRJNA876641 | 24045 | 229 | 2.378205 | 5.44608945 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 68.9 | 1.86e-11 | NR | MBS0645922.1 | 2026799 | g23971 | i0 | 63.5 | 0.681222707423581 | 52 | 19 | 68.1 | 0 | 17 | 172 | 782 | 833 | MBS0645922.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 156 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28886775 | 28886775 | PRJNA876641_P_NODE_9768_length_283_cov_2.004762_g9694_i0 | PRJNA876641 | 9768 | 283 | 2.004762 | 5.67347646 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 94.4 | 4.43e-20 | NR | MCB1205730.1 | 2499141 | g9694 | i0 | 54.3 | 0.996466431095406 | 94 | 37 | 99.6 | 1 | 283 | 2 | 201 | 288 | MCB1205730.1 peroxiredoxin [Verrucomicrobiia bacterium] | diamond | 282 | 94.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29076484 | 29076484 | PRJNA876641_P_NODE_22928_length_241_cov_2.619048_g22854_i0 | PRJNA876641 | 22928 | 241 | 2.619048 | 6.31190568 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 45.1 | 0.00376 | NR | MEI6341235.1 | 2026799 | g22854 | i0 | 41.4 | 0.721991701244813 | 58 | 32 | 69.7 | 1 | 208 | 41 | 109 | 166 | MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] | diamond | 174 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29526504 | 29526504 | PRJNA876641_P_NODE_1790_length_514_cov_1.374150_g1716_i0 | PRJNA876641 | 1790 | 514 | 1.37415 | 7.063131 | Bacteria | 2 | Bacteria | Bacteria | 63.2 | 3.57e-8 | NR | MBC8243713.1 | 2026799 | g1716 | i0 | 39.2 | 4.65175097276265 | 79 | 48 | 46.1 | 0 | 238 | 2 | 71 | 149 | MBC8243713.1 Gfo/Idh/MocA family oxidoreductase [Verrucomicrobiota bacterium] | diamond | 2391 | 63.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30000239 | 30000239 | PRJNA876641_P_NODE_10731_length_278_cov_1.243902_g10657_i0 | PRJNA876641 | 10731 | 278 | 1.243902 | 3.45804756 | Bacteria | 2 | Bacteria | Bacteria | 95.5 | 1.62e-20 | NR | MCF6313004.1 | 2026801 | g10657 | i0 | 55.4 | 5.9568345323741 | 92 | 41 | 99.3 | 0 | 276 | 1 | 25 | 116 | MCF6313004.1 FAD-dependent oxidoreductase [Verrucomicrobiales bacterium] | diamond | 1656 | 95.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 30908463 | 30908463 | PRJNA876641_P_NODE_14694_length_256_cov_1.278689_g14620_i0 | PRJNA876641 | 14694 | 256 | 1.278689 | 3.27344384 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 61.6 | 9.64e-9 | NR | MEZ5304281.1 | 2026801 | g14620 | i0 | 42.5 | 0.9375 | 80 | 43 | 93.8 | 1 | 254 | 15 | 145 | 221 | MEZ5304281.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 240 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 31035010 | 31035010 | PRJNA876641_P_NODE_18915_length_247_cov_0.885057_g18841_i0 | PRJNA876641 | 18915 | 247 | 0.885057 | 2.18609079 | Limisphaerales bacterium | 2052186 | Bacteria | Bacteria | 78.6 | 1.92e-15 | NR | MEI9863482.1 | 2052186 | g18841 | i0 | 54.5 | 0.801619433198381 | 66 | 30 | 80.2 | 0 | 246 | 49 | 31 | 96 | MEI9863482.1 hypothetical protein [Limisphaerales bacterium] | diamond | 198 | 78.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaerales bacterium | |||
| 31129117 | 31129117 | PRJNA876641_P_NODE_12615_length_267_cov_1.530928_g12541_i0 | PRJNA876641 | 12615 | 267 | 1.530928 | 4.08757776 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 68.9 | 2.46e-11 | NR | RYD71398.1 | 2026800 | g12541 | i0 | 55.4 | 0.629213483146067 | 56 | 25 | 62.9 | 0 | 6 | 173 | 147 | 202 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 168 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 31603908 | 31603908 | PRJNA876641_P_NODE_1416_length_560_cov_2.172485_g1343_i0 | PRJNA876641 | 1416 | 560 | 2.172485 | 12.165916 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 213 | 4.36e-65 | NR | RYD65414.1 | 2026800 | g1343 | i0 | 77.7 | 0.696428571428571 | 130 | 29 | 69.6 | 0 | 559 | 170 | 207 | 336 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 390 | 213 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32078334 | 32078334 | PRJNA876641_P_NODE_12558_length_267_cov_2.097938_g12484_i0 | PRJNA876641 | 12558 | 267 | 2.097938 | 5.60149446 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 54.3 | 3.73e-6 | NR | MDH7503595.1 | 2026799 | g12484 | i0 | 54.2 | 0.539325842696629 | 48 | 22 | 53.9 | 0 | 82 | 225 | 34 | 81 | MDH7503595.1 phosphatidylinositol-specific phospholipase C/glycerophosphodiester phosphodiesterase family protein [Verrucomicrobiota bacterium] | diamond | 144 | 54.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32078346 | 32078346 | PRJNA876641_P_NODE_23918_length_233_cov_2.406250_g23844_i0 | PRJNA876641 | 23918 | 233 | 2.40625 | 5.6065625 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 70.1 | 1.95e-12 | NR | RYD36583.1 | 2026800 | g23844 | i0 | 61.5 | 0.669527896995708 | 52 | 16 | 61.8 | 1 | 6 | 149 | 167 | 218 | RYD36583.1 MAG: Mpv17/PMP22 family protein [Verrucomicrobiaceae bacterium] | diamond | 156 | 70.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32268403 | 32268403 | PRJNA876641_P_NODE_4418_length_366_cov_1.238908_g4344_i0 | PRJNA876641 | 4418 | 366 | 1.238908 | 4.53440328 | Haloferula luteola | 595692 | Bacteria | Bacteria | 89.4 | 1.77e-18 | NR | WP_184015085.1 | 595692 | g4344 | i0 | 41.2 | 3.71311475409836 | 119 | 66 | 94.3 | 1 | 3 | 347 | 159 | 277 | WP_184015085.1 choice-of-anchor A family protein [Haloferula luteola] | diamond | 1359 | 89.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Haloferula | Haloferula luteola | |
| 32773361 | 32773361 | PRJNA876641_P_NODE_8820_length_289_cov_1.120370_g8746_i0 | PRJNA876641 | 8820 | 289 | 1.12037 | 3.2378693 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 89 | 2.55e-18 | NR | MEP6937692.1 | 2201154 | g8746 | i0 | 46.9 | 1.99307958477509 | 96 | 50 | 98.6 | 1 | 289 | 5 | 23 | 118 | MEP6937692.1 fumarylacetoacetase [Chthoniobacterales bacterium] | diamond | 576 | 89 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;