RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA876641", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA876641 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
853237 853237 PRJNA876641_P_NODE_1_length_7216_cov_26.949321_g0_i0 PRJNA876641 1 7216 26.949321 1944.66300336 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2505 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i0 92.036 0.666435698447894 1783 137 67 5 5427 7206 5329 7109 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4809 2505 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
19979877 19979877 PRJNA876641_P_NODE_20736_length_244_cov_1.719298_g20662_i0 PRJNA876641 20736 244 1.719298 4.19508712 Comovirus siliquae 3047677 Viruses Viruses 435 1.87e-117   NTclustered gi|18028553|gb|AF330210.1|AF330210 12260 g20662 i0 98.776 19.077868852459 245 2 100 1 1 244 140 384 Bean pod mottle virus isolate I-JH1 capsid polyprotein gene, partial cds blastn 4655 435 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Comovirus Comovirus siliquae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;