RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA876641" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA876641 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2128692 2128692 PRJNA876641_P_NODE_8502_length_291_cov_1.389908_g8428_i0 PRJNA876641 8502 291 1.389908 4.04463228 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 147 1.0899999999999999e-43   NR KAF4712660.1 32597 g8428 i0 71.3 10.5257731958763 94 27 96.9 0 290 9 23 116 KAF4712660.1 iso-1-cytochrome c [Perkinsus olseni] diamond 3063 147 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
7231535 7231535 PRJNA876641_P_NODE_7546_length_305_cov_1.353448_g7472_i0 PRJNA876641 7546 305 1.353448 4.1280164 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 135 1.42e-36   NR XP_002774056.1 423536 g7472 i0 77.6 0.836065573770492 85 19 83.6 0 3 257 230 314 XP_002774056.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 255 135 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
8506282 8506282 PRJNA876641_P_NODE_8447_length_291_cov_2.293578_g8373_i0 PRJNA876641 8447 291 2.293578 6.67431198 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 148 3.3399999999999993e-31   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g8373 i0 80.928 25.4707903780069 194 31 66 5 1 191 244 434 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 7412 148 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
12332256 12332256 PRJNA876641_P_NODE_18050_length_248_cov_0.880000_g17976_i0 PRJNA876641 18050 248 0.88 2.1824 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 141 4.65e-29   NTclustered gi|294933094|ref|XM_002780549.1| 423536 g17976 i0 90.654 47.2056451612903 107 8 43 2 128 233 595 490 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 11707 141 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
18704562 18704562 PRJNA876641_P_NODE_18355_length_248_cov_0.880000_g18281_i0 PRJNA876641 18355 248 0.88 2.1824 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.34e-4   NTclustered gi|294897524|ref|XM_002775945.1| 423536 g18281 i0 97.143 4.20564516129032 35 1 14 0 11 45 620 586 Perkinsus marinus ATCC 50983 Ran-binding protein, putative, mRNA blastn 1043 60.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
18704744 18704744 PRJNA876641_P_NODE_7455_length_306_cov_1.978541_g7381_i0 PRJNA876641 7455 306 1.978541 6.05433546 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 156 8.739999999999999e-45   NR KAF4686433.1 32597 g7381 i0 73 3.93137254901961 100 27 98 0 304 5 75 174 KAF4686433.1 40S ribosomal protein S6 [Perkinsus olseni] diamond 1203 157 0.993630573248408 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
18704777 18704777 PRJNA876641_P_NODE_9435_length_285_cov_1.806604_g9361_i0 PRJNA876641 9435 285 1.806604 5.1488214 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 111 4.28e-20   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g9361 i0 83.065 9.65964912280702 124 19 43 2 15 137 322 444 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 2753 111 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27687456 27687456 PRJNA876641_P_NODE_3164_length_413_cov_4.135294_g3090_i0 PRJNA876641 3164 413 4.135294 17.07876422 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 93.2 5.25e-20   NR TEB19254.1 2494336 g3090 i0 44.3 0.76997578692494 106 55 77 2 4 321 157 258 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 318 93.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
30213073 30213073 PRJNA876641_P_NODE_1272_length_589_cov_2.908915_g1199_i0 PRJNA876641 1272 589 2.908915 17.13350935 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 268 1e-88   NR XP_002778466.1 423536 g1199 i0 71.4 0.942275042444822 185 52 93.7 1 555 4 1 185 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 555 268 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31991422 31991422 PRJNA876641_P_NODE_19938_length_245_cov_2.122093_g19864_i0 PRJNA876641 19938 245 2.122093 5.19912785 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 87 9.63e-18   NR KAF4653884.1 32597 g19864 i0 54.3 3.99183673469388 81 36 99.2 1 1 243 446 525 KAF4653884.1 hypothetical protein FOZ61_008630 [Perkinsus olseni] diamond 978 87 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32054722 32054722 PRJNA876641_P_NODE_19098_length_247_cov_0.885057_g19024_i0 PRJNA876641 19098 247 0.885057 2.18609079 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 67.4 7.75e-11   NR KAF4757260.1 32597 g19024 i0 40.7 7.87044534412955 81 47 98.4 1 3 245 89 168 KAF4757260.1 hypothetical protein FOZ63_034007 [Perkinsus olseni] diamond 1944 67.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32276491 32276491 PRJNA876641_P_NODE_21038_length_244_cov_0.900585_g20964_i0 PRJNA876641 21038 244 0.900585 2.1974274 Cryptophyceae 3027 SAR_Eukaryotes SAR_Eukaryotes 101 3.36e-25   NR KAF4670674.1 32597 g20964 i0 66.7 18.7254098360656 69 23 84.8 0 210 4 1 69 KAF4670674.1 Ubiquitin-conjugating enzyme E2 D3 [Perkinsus olseni] diamond 4569 101 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;