RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA876641", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA876641 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26651527 26651527 PRJNA876641_P_NODE_1221_length_597_cov_2.229008_g1148_i0 PRJNA876641 1221 597 2.229008 13.30717776 root 1 Root_unresolved Root_unresolved 153 2.96e-39   NR NP_043127.1 1891767 g1148 i0 71.8 2.03517587939698 103 25 49.7 1 95 391 77 179 NP_043127.1 large T antigen [Betapolyomavirus macacae] diamond 1215 153 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
29526506 29526506 PRJNA876641_P_NODE_6190_length_326_cov_2.268775_g6116_i0 PRJNA876641 6190 326 2.268775 7.3962065 root 1 Root_unresolved Root_unresolved 67.8 1.59e-10   NR NP_043127.1 1891767 g6116 i0 51.5 2.73312883435583 99 48 91.1 0 322 26 83 181 NP_043127.1 large T antigen [Betapolyomavirus macacae] diamond 891 67.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32023205 32023205 PRJNA876641_P_NODE_7238_length_310_cov_1.421941_g7164_i0 PRJNA876641 7238 310 1.421941 4.4080171 root 1 Root_unresolved Root_unresolved 66.6 4.96e-11   NR CAA10165.1 1891767 g7164 i0 58.9 2.63225806451613 56 19 50.3 1 153 308 77 132 CAA10165.1 large tumor antigen [Betapolyomavirus macacae] diamond 816 66.6 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;