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contig_metadata

28 rows where bioproject = "PRJNA876641" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA876641 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11056835 11056835 PRJNA876641_P_NODE_16389_length_250_cov_1.305085_g16315_i0 PRJNA876641 16389 250 1.305085 3.2627125 root 1 Root_unresolved Root_unresolved 122 3.05e-33   NR MBM3157874.1 2026724 g16315 i0 70.4 13.656 81 24 97.2 0 250 8 72 152 MBM3157874.1 peptide-methionine (S)-S-oxide reductase MsrA [Chloroflexota bacterium] diamond 3414 122 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
17431414 17431414 PRJNA876641_P_NODE_22814_length_242_cov_0.911243_g22740_i0 PRJNA876641 22814 242 0.911243 2.20520806 Chloroflexota bacterium 2026724 Bacteria Bacteria 80.1 8.47e-16   NR MFN8518570.1 2026724 g22740 i0 53.9 1.71074380165289 76 35 94.2 0 3 230 80 155 MFN8518570.1 Rid family hydrolase [Chloroflexota bacterium] diamond 414 80.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
25079110 25079110 PRJNA876641_P_NODE_10160_length_281_cov_1.379808_g10086_i0 PRJNA876641 10160 281 1.379808 3.87726048 Thermosporothrix sp. COM3 2490863 Bacteria Bacteria 52.8 0.026   NTclustered gi|1606557374|dbj|AP019376.1| 2490863 g10086 i0 100 0.099644128113879 28 0 10 0 134 161 1035009 1034982 Thermosporothrix sp. COM3 DNA, nearly complete genome blastn 28 52.8 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Thermosporotrichaceae Thermosporothrix Thermosporothrix sp. COM3
26897214 26897214 PRJNA876641_P_NODE_3781_length_388_cov_0.911111_g3707_i0 PRJNA876641 3781 388 0.911111 3.53511068 SAR202 cluster bacterium 2030829 Bacteria Bacteria 49.3 8.42e-4   NR MDP6715894.1 2030829 g3707 i0 51.2 0.634020618556701 41 20 31.7 0 261 383 76 116 MDP6715894.1 PKD domain-containing protein [SAR202 cluster bacterium] diamond 246 49.3 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium
27157805 27157805 PRJNA876641_P_NODE_9582_length_284_cov_2.265403_g9508_i0 PRJNA876641 9582 284 2.265403 6.43374452 Thermoflexus 1495649 Bacteria Bacteria 80.9 1.82e-15   NR WP_088572041.1 1495650 g9508 i0 45.6 3.80281690140845 90 28 95.1 1 283 14 332 400 WP_088572041.1 elongation factor Tu [Thermoflexus hugenholtzii] diamond 1080 80.9 1 Bacteria   Bacillati Chloroflexota Thermoflexia Thermoflexales Thermoflexaceae Thermoflexus Thermoflexus hugenholtzii
27221059 27221059 PRJNA876641_P_NODE_13782_length_261_cov_1.212766_g13708_i0 PRJNA876641 13782 261 1.212766 3.16531926 FCB group 1783270 Bacteria Bacteria 85.1 2.55e-17   NR WP_028459308.1 867845 g13708 i0 66.1 8.13793103448276 59 20 67.8 0 83 259 3 61 WP_028459308.1 alcohol dehydrogenase AdhP [Chloroflexus sp. Y-396-1] diamond 2124 85.1 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae Chloroflexus Chloroflexus sp. Y-396-1
27781912 27781912 PRJNA876641_P_NODE_22844_length_242_cov_0.911243_g22770_i0 PRJNA876641 22844 242 0.911243 2.20520806 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 59.7 3.9e-8   NR MCH2656052.1 2026734 g22770 i0 42.1 3.79338842975207 76 44 94.2 0 241 14 762 837 MCH2656052.1 aminopeptidase N [Dehalococcoidia bacterium] diamond 918 59.7 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
27884530 27884530 PRJNA876641_P_NODE_7985_length_298_cov_2.431111_g7911_i0 PRJNA876641 7985 298 2.431111 7.24471078 root 1 Root_unresolved Root_unresolved 188 1.4199999999999996e-55   NR MDQ3097113.1 2026724 g7911 i0 89.9 45.8456375838926 99 10 99.7 0 298 2 268 366 MDQ3097113.1 acyl-CoA carboxylase subunit beta [Chloroflexota bacterium] diamond 13662 188 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28286765 28286765 PRJNA876641_P_NODE_19346_length_246_cov_1.381503_g19272_i0 PRJNA876641 19346 246 1.381503 3.39849738 Caldilineaceae bacterium 2614250 Bacteria Bacteria 75.1 4.69e-15   NR MBX3051404.1 2614250 g19272 i0 49.3 4.67073170731707 75 37 90.2 1 22 243 1 75 MBX3051404.1 OsmC family protein [Caldilineaceae bacterium] diamond 1149 75.1 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
28666000 28666000 PRJNA876641_P_NODE_5827_length_333_cov_1.519231_g5753_i0 PRJNA876641 5827 333 1.519231 5.05903923 Chloroflexota bacterium 2026724 Bacteria Bacteria 48.1 4.31e-4   NR NDJ34129.1 2026724 g5753 i0 32 2.55855855855856 100 55 82.9 2 297 22 36 130 NDJ34129.1 Hsp20/alpha crystallin family protein [Chloroflexota bacterium] diamond 852 48.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29494847 29494847 PRJNA876641_P_NODE_5710_length_335_cov_2.496183_g5636_i0 PRJNA876641 5710 335 2.496183 8.36221305 Bacteria 2 Bacteria Bacteria 101 2.04e-22   NR MDQ3707516.1 2026724 g5636 i0 42.5 3.83283582089552 113 58 94.9 2 2 319 352 464 MDQ3707516.1 cytochrome P450 [Chloroflexota bacterium] diamond 1284 101 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29644250 29644250 PRJNA876641_P_NODE_23410_length_241_cov_0.916667_g23336_i0 PRJNA876641 23410 241 0.916667 2.20916747 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 89 7.41e-20   NR MEO7295221.1 3047546 g23336 i0 60.3 0.970954356846473 78 29 94.6 1 237 10 66 143 MEO7295221.1 NAD(P)H-dependent oxidoreductase [Candidatus Limnocylindria bacterium] diamond 234 89 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
29929073 29929073 PRJNA876641_P_NODE_6171_length_327_cov_1.086614_g6097_i0 PRJNA876641 6171 327 1.086614 3.55322778 Chloroflexota bacterium 2026724 Bacteria Bacteria 82.4 2.52e-16   NR RMG93555.1 2026724 g6097 i0 45.9 1 109 54 99.1 2 325 2 80 184 RMG93555.1 MAG: mechanosensitive ion channel family protein [Chloroflexota bacterium] diamond 327 82.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29992126 29992126 PRJNA876641_P_NODE_5391_length_342_cov_2.052045_g5317_i0 PRJNA876641 5391 342 2.052045 7.0179939 Anaerolineae bacterium 2052143 Bacteria Bacteria 55.1 7.7300000000000005e-07   NR MFN8475015.1 2052143 g5317 i0 56.3 1.36842105263158 48 21 42.1 0 334 191 59 106 MFN8475015.1 Hsp20/alpha crystallin family protein [Anaerolineae bacterium] diamond 468 55.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
30126272 30126272 PRJNA876641_P_NODE_7832_length_301_cov_1.013158_g7758_i0 PRJNA876641 7832 301 1.013158 3.04960558 Bacteria 2 Bacteria Bacteria 69.3 1.95e-11   NR HOW91395.1 2024896 g7758 i0 42.7 3.93687707641196 96 48 95.7 1 291 4 47 135 HOW91395.1 SDR family NAD(P)-dependent oxidoreductase [Anaerolineaceae bacterium] diamond 1185 69.7 0.994261119081779 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
30655488 30655488 PRJNA876641_P_NODE_7893_length_300_cov_1.008811_g7819_i0 PRJNA876641 7893 300 1.008811 3.026433 Chloroflexota bacterium 2026724 Bacteria Bacteria 68.6 2.31e-11   NR MDQ3702910.1 2026724 g7819 i0 40 6.11 100 53 98 2 300 7 53 147 MDQ3702910.1 phosphate ABC transporter substrate-binding protein PstS [Chloroflexota bacterium] diamond 1833 68.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30758444 30758444 PRJNA876641_P_NODE_20854_length_244_cov_0.900585_g20780_i0 PRJNA876641 20854 244 0.900585 2.1974274 Bacillati 1783272 Bacteria Bacteria 46.6 0.00122   NR HLY30777.1 2306968 g20780 i0 54.8 2.21311475409836 31 14 38.1 0 232 140 106 136 HLY30777.1 hypothetical protein [Ktedonobacterales bacterium] diamond 540 46.6 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium
30781914 30781914 PRJNA876641_P_NODE_10134_length_281_cov_1.480769_g10060_i0 PRJNA876641 10134 281 1.480769 4.16096089 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 94.4 1.35e-21   NR MBN1644268.1 2026733 g10060 i0 50 1.63345195729537 88 39 94 1 8 271 95 177 MBN1644268.1 N-acetyltransferase [Dehalococcoidales bacterium] diamond 459 94.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
30789966 30789966 PRJNA876641_P_NODE_17954_length_248_cov_0.880000_g17880_i0 PRJNA876641 17954 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 109 1.16e-25   NR OQY47098.1 1972460 g17880 i0 69.3 5.70967741935484 75 22 90.7 1 22 246 268 341 OQY47098.1 MAG: ABC transporter substrate-binding protein [Anaerolineaceae bacterium 4572_78] diamond 1416 109 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium 4572_78
31485606 31485606 PRJNA876641_P_NODE_23876_length_234_cov_2.372671_g23802_i0 PRJNA876641 23876 234 2.372671 5.55205014 Bacteria 2 Bacteria Bacteria 48.5 3.1e-4   NR MBM4405424.1 2026724 g23802 i0 46.3 1.33333333333333 54 29 69.2 0 1 162 549 602 MBM4405424.1 molecular chaperone DnaK [Chloroflexota bacterium] diamond 312 48.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31517191 31517191 PRJNA876641_P_NODE_19736_length_246_cov_0.890173_g19662_i0 PRJNA876641 19736 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 59.7 3.78e-8   NR MBI5305231.1 2026724 g19662 i0 65.9 2.10975609756098 41 14 50 0 244 122 323 363 MBI5305231.1 serine hydrolase [Chloroflexota bacterium] diamond 519 60.1 0.993344425956739 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31548901 31548901 PRJNA876641_P_NODE_17516_length_249_cov_0.875000_g17442_i0 PRJNA876641 17516 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 123 9.49e-32   NR MCC6613445.1 2052143 g17442 i0 64.2 2.92771084337349 81 29 97.6 0 5 247 3 83 MCC6613445.1 NAD(P)-dependent alcohol dehydrogenase [Anaerolineae bacterium] diamond 729 124 0.991935483870968 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31603913 31603913 PRJNA876641_P_NODE_16896_length_250_cov_0.870056_g16822_i0 PRJNA876641 16896 250 0.870056 2.17514 Chloroflexota bacterium 2026724 Bacteria Bacteria 66.6 1.51e-11   NR MBI3738112.1 2026724 g16822 i0 43.7 4.836 87 38 99.6 3 1 249 9 88 MBI3738112.1 YbhB/YbcL family Raf kinase inhibitor-like protein [Chloroflexota bacterium] diamond 1209 66.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31635414 31635414 PRJNA876641_P_NODE_8836_length_289_cov_1.069444_g8762_i0 PRJNA876641 8836 289 1.069444 3.09069316 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 44.3 0.00906   NR UCD10159.1 2026733 g8762 i0 32.9 1.80622837370242 82 51 82 2 43 279 56 136 UCD10159.1 MAG: PH domain-containing protein [Dehalococcoidales bacterium] diamond 522 44.3 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
31738227 31738227 PRJNA876641_P_NODE_18357_length_248_cov_0.880000_g18283_i0 PRJNA876641 18357 248 0.88 2.1824 Chloroflexota 200795 Bacteria Bacteria 117 2.19e-28   NR NOZ29752.1 2026724 g18283 i0 74.6 46.8870967741936 71 18 85.9 0 216 4 1938 2008 NOZ29752.1 hypothetical protein [Chloroflexota bacterium] diamond 11628 117 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31983360 31983360 PRJNA876641_P_NODE_14138_length_259_cov_1.284946_g14064_i0 PRJNA876641 14138 259 1.284946 3.32801014 Caldilineales bacterium 2306055 Bacteria Bacteria 134 4.68e-36   NR HIQ12687.1 2306055 g14064 i0 70.6 5.87258687258687 85 25 98.5 0 257 3 189 273 HIQ12687.1 GTP cyclohydrolase I FolE [Caldilineales bacterium] diamond 1521 134 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales     Caldilineales bacterium
32023201 32023201 PRJNA876641_P_NODE_21318_length_244_cov_0.900585_g21244_i0 PRJNA876641 21318 244 0.900585 2.1974274 FCB group 1783270 Bacteria Bacteria 97.8 7.689999999999999e-23   NR HMI31684.1 2952938 g21244 i0 55 2.95081967213115 80 35 97.1 1 242 6 68 147 HMI31684.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Limnocylindrales bacterium] diamond 720 98.2 0.995926680244399 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
32268409 32268409 PRJNA876641_P_NODE_9158_length_287_cov_1.205607_g9084_i0 PRJNA876641 9158 287 1.205607 3.46009209 Chloroflexota bacterium 2026724 Bacteria Bacteria 48.5 3.84e-4   NR MEK7859895.1 2026724 g9084 i0 39.3 0.930313588850174 89 43 92 3 287 24 134 212 MEK7859895.1 hypothetical protein [Chloroflexota bacterium] diamond 267 48.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;