RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJNA876641", tax_phylum = "Candidatus Hydrothermarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Candidatus Hydrothermarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA876641 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30371629 30371629 PRJNA876641_P_NODE_10232_length_281_cov_1.043269_g10158_i0 PRJNA876641 10232 281 1.043269 2.93158589 Candidatus Hydrothermarchaeales archaeon 3107144 Archaea Archaea 51.6 3.65e-5   NR MFQ6137201.1 3107144 g10158 i0 38.8 3.73665480427046 85 35 90.7 3 262 8 186 253 MFQ6137201.1 prephenate dehydratase [Candidatus Hydrothermarchaeales archaeon] diamond 1050 51.6 1 Archaea   Methanobacteriati Candidatus Hydrothermarchaeota Candidatus Hydrothermarchaeia Candidatus Hydrothermarchaeales     Candidatus Hydrothermarchaeales archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;