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contig_metadata

22 rows where bioproject = "PRJNA876641" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 22 ✖

tax_kingdom 1

bioproject 1

  • PRJNA876641 · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1238469 1238469 PRJNA876641_P_NODE_20901_length_244_cov_0.900585_g20827_i0 PRJNA876641 20901 244 0.900585 2.1974274 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 148 2.33e-39   NR HEX7315084.1 2283092 g20827 i0 93.6 0.959016393442623 78 5 95.9 0 10 243 21 98 HEX7315084.1 FG-GAP-like repeat-containing protein [Pyrinomonadaceae bacterium] diamond 234 148 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
3403885 3403885 PRJNA876641_P_NODE_15783_length_251_cov_0.865169_g15709_i0 PRJNA876641 15783 251 0.865169 2.17157419 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 174 4.65e-39   NTclustered gi|2874253709|emb|OY969474.1| 171953 g15709 i0 81.448 166.286852589641 221 33 95 8 36 251 1538110 1537893 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 41738 174 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
3403993 3403993 PRJNA876641_P_NODE_21963_length_243_cov_0.905882_g21889_i0 PRJNA876641 21963 243 0.905882 2.20129326 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 126 9.88e-33   NR HEV8159737.1 2283092 g21889 i0 77.5 0.987654320987654 80 18 98.8 0 241 2 195 274 HEV8159737.1 gephyrin-like molybdotransferase Glp [Pyrinomonadaceae bacterium] diamond 240 126 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
12332417 12332417 PRJNA876641_P_NODE_7130_length_311_cov_3.126050_g7056_i0 PRJNA876641 7130 311 3.12605 9.7220155 Geothrix sp. 21YS21S-2 3068893 Bacteria Bacteria 65.8 3.73e-6   NTclustered gi|2566094019|gb|CP132910.1| 3068893 g7056 i0 95.122 0.131832797427653 41 2 13 0 119 159 1463586 1463626 Geothrix sp. 21YS21S-2 chromosome, complete genome blastn 41 65.8 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp. 21YS21S-2
26770421 26770421 PRJNA876641_P_NODE_6881_length_315_cov_2.822314_g6807_i0 PRJNA876641 6881 315 2.822314 8.8902891 Acidobacteriota bacterium 1978231 Bacteria Bacteria 121 4.04e-33   NR MDQ7008654.1 1978231 g6807 i0 77 0.828571428571429 87 19 82.9 1 315 55 26 111 MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] diamond 261 121 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26801977 26801977 PRJNA876641_P_NODE_10361_length_280_cov_1.289855_g10287_i0 PRJNA876641 10361 280 1.289855 3.611594 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 109 1.26e-25   NR HTQ52887.1 2212468 g10287 i0 62.8 3.68571428571429 86 29 91.1 3 279 25 127 210 HTQ52887.1 GH1 family beta-glucosidase [Bryobacteraceae bacterium] diamond 1032 109 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
26841994 26841994 PRJNA876641_P_NODE_19821_length_246_cov_0.890173_g19747_i0 PRJNA876641 19821 246 0.890173 2.18982558 Pseudomonadati 3379134 Bacteria Bacteria 68.6 2.76e-11   NR MBI2680140.1 332163 g19747 i0 56.9 4.74390243902439 65 23 78 2 54 245 5 65 MBI2680140.1 DUF1624 domain-containing protein [Candidatus Solibacter usitatus] diamond 1167 68.9 0.995645863570392 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Solibacter Candidatus Solibacter usitatus
27252851 27252851 PRJNA876641_P_NODE_19623_length_246_cov_0.890173_g19549_i0 PRJNA876641 19623 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 89.4 1.49e-18   NR MCC6264472.1 2026791 g19549 i0 64.8 32.6585365853659 71 25 86.6 0 3 215 115 185 MCC6264472.1 molecular chaperone DnaK [Bryobacterales bacterium] diamond 8034 89.7 0.996655518394649 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
27466211 27466211 PRJNA876641_P_NODE_10643_length_278_cov_1.809756_g10569_i0 PRJNA876641 10643 278 1.809756 5.03112168 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 45.1 0.00814   NR HEX7177571.1 2283092 g10569 i0 46.8 0.507194244604317 47 20 50.7 1 138 278 258 299 HEX7177571.1 bifunctional oligoribonuclease/PAP phosphatase NrnA [Pyrinomonadaceae bacterium] diamond 141 45.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29179257 29179257 PRJNA876641_P_NODE_21629_length_243_cov_0.905882_g21555_i0 PRJNA876641 21629 243 0.905882 2.20129326 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 64.3 3.75e-10   NR MBX3296917.1 1978231 g21555 i0 78.8 4.79012345679012 33 7 40.7 0 100 2 2 34 MBX3296917.1 pirin family protein [Acidobacteriota bacterium] diamond 1164 64.7 0.993817619783617 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29202751 29202751 PRJNA876641_P_NODE_1469_length_552_cov_4.519833_g1396_i0 PRJNA876641 1469 552 4.519833 24.94947816 Acidobacteriota bacterium 1978231 Bacteria Bacteria 135 1.16e-37   NR MDQ7008653.1 1978231 g1396 i0 83.9 0.472826086956522 87 14 47.3 0 421 161 24 110 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 261 135 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29494848 29494848 PRJNA876641_P_NODE_6970_length_314_cov_2.020747_g6896_i0 PRJNA876641 6970 314 2.020747 6.34514558 Bacteria 2 Bacteria Bacteria 53.1 1.85e-5   NR MBL0211669.1 2052165 g6896 i0 39.5 5.84713375796178 76 42 71.7 3 9 233 155 227 MBL0211669.1 hypothetical protein [Holophagaceae bacterium] diamond 1836 53.5 0.992523364485981 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae   Holophagaceae bacterium
29683950 29683950 PRJNA876641_P_NODE_22530_length_242_cov_0.911243_g22456_i0 PRJNA876641 22530 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 82.8 6.52e-17   NR HTR22663.1 2282142 g22456 i0 53.2 5.87603305785124 79 36 97.9 1 3 239 112 189 HTR22663.1 DUF4197 domain-containing protein [Terriglobales bacterium] diamond 1422 82.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
29834121 29834121 PRJNA876641_P_NODE_4671_length_359_cov_1.783217_g4597_i0 PRJNA876641 4671 359 1.783217 6.40174903 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 88.6 4.16e-18   NR MDR3737318.1 2052142 g4597 i0 46.4 0.919220055710306 110 52 87.7 3 2 316 200 307 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 330 88.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30181540 30181540 PRJNA876641_P_NODE_17072_length_249_cov_1.562500_g16998_i0 PRJNA876641 17072 249 1.5625 3.890625 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 129 9.61e-33   NR MBX9604362.1 2212468 g16998 i0 76.5 0.975903614457831 81 19 97.6 0 5 247 304 384 MBX9604362.1 signal peptide peptidase SppA [Bryobacteraceae bacterium] diamond 243 129 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30253082 30253082 PRJNA876641_P_NODE_21212_length_244_cov_0.900585_g21138_i0 PRJNA876641 21212 244 0.900585 2.1974274 Pseudomonadati 3379134 Bacteria Bacteria 124 1.44e-31   NR MBM3767909.1 1978231 g21138 i0 72.7 14.4590163934426 77 21 94.7 0 12 242 229 305 MBM3767909.1 malate synthase A [Acidobacteriota bacterium] diamond 3528 124 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31358997 31358997 PRJNA876641_P_NODE_16716_length_250_cov_0.870056_g16642_i0 PRJNA876641 16716 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 90.9 1.34e-19   NR MDQ3816894.1 1978231 g16642 i0 53 10.92 83 39 99.6 0 1 249 221 303 MDQ3816894.1 DUF2891 domain-containing protein [Acidobacteriota bacterium] diamond 2730 90.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31540694 31540694 PRJNA876641_P_NODE_17956_length_248_cov_0.880000_g17882_i0 PRJNA876641 17956 248 0.88 2.1824 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.9 1.31e-9   NR MEJ2421092.1 1978231 g17882 i0 45.9 1.63306451612903 74 40 89.5 0 234 13 380 453 MEJ2421092.1 hypothetical protein [Acidobacteriota bacterium] diamond 405 63.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31730263 31730263 PRJNA876641_P_NODE_2217_length_469_cov_2.068182_g2143_i0 PRJNA876641 2217 469 2.068182 9.69977358 Acidobacteriota bacterium 1978231 Bacteria Bacteria 73.6 1.78e-13   NR MCI0662186.1 1978231 g2143 i0 42 1.18976545842217 88 51 56.3 0 320 57 3 90 MCI0662186.1 RNA-binding protein [Acidobacteriota bacterium] diamond 558 73.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31801480 31801480 PRJNA876641_P_NODE_9837_length_283_cov_1.380952_g9763_i0 PRJNA876641 9837 283 1.380952 3.90809416 Chloracidobacterium 458032 Bacteria Bacteria 106 6.96e-25   NR WP_058867807.1 458033 g9763 i0 58.6 3.81625441696113 87 36 92.2 0 262 2 142 228 WP_058867807.1 dipeptidase [Chloracidobacterium thermophilum] diamond 1080 106 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium thermophilum
32647154 32647154 PRJNA876641_P_NODE_18280_length_248_cov_0.880000_g18206_i0 PRJNA876641 18280 248 0.88 2.1824 Sulfidibacter corallicola 2818388 Bacteria Bacteria 108 1.59e-25   NR WP_237377478.1 2818388 g18206 i0 62.2 0.991935483870968 82 30 98 1 243 1 140 221 WP_237377478.1 aldehyde dehydrogenase [Sulfidibacter corallicola] diamond 246 108 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Acanthopleuribacterales Acanthopleuribacteraceae Sulfidibacter Sulfidibacter corallicola
32678740 32678740 PRJNA876641_P_NODE_15580_length_251_cov_1.601124_g15506_i0 PRJNA876641 15580 251 1.601124 4.01882124 Luteitalea sp. 2004800 Bacteria Bacteria 45.4 0.00453   NR WP_291988344.1 2004800 g15506 i0 54.3 0.418326693227092 35 16 41.8 0 251 147 20 54 WP_291988344.1 hypothetical protein [Luteitalea sp.] diamond 105 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;