contig_metadata
11 rows where bioproject = "PRJNA876641", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28823460 | 28823460 | PRJNA876641_P_NODE_5648_length_337_cov_1.166667_g5574_i0 | PRJNA876641 | 5648 | 337 | 1.166667 | 3.93166779 | Geomonas ferrireducens | 2570227 | Bacteria | Bacteria | 104 | 5.359999999999999e-24 | NR | WP_246044532.1 | 2570227 | g5574 | i0 | 44.1 | 10.7181008902077 | 111 | 62 | 98.8 | 0 | 335 | 3 | 191 | 301 | WP_246044532.1 sensor histidine kinase [Geomonas ferrireducens] | diamond | 3612 | 104 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas ferrireducens | ||
| 28981842 | 28981842 | PRJNA876641_P_NODE_8588_length_290_cov_1.368664_g8514_i0 | PRJNA876641 | 8588 | 290 | 1.368664 | 3.9691256 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 117 | 4.77e-29 | NR | RMF12857.1 | 2080303 | g8514 | i0 | 58.3 | 1.98620689655172 | 96 | 40 | 99.3 | 0 | 289 | 2 | 81 | 176 | RMF12857.1 MAG: methyltransferase domain-containing protein [Candidatus Dadabacteria bacterium] | diamond | 576 | 117 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 29265590 | 29265590 | PRJNA876641_P_NODE_24169_length_226_cov_2.013072_g24095_i0 | PRJNA876641 | 24169 | 226 | 2.013072 | 4.54954272 | Desulfonema limicola | 45656 | Bacteria | Bacteria | 96.3 | 1.14e-21 | NR | WP_207689579.1 | 45656 | g24095 | i0 | 80.4 | 0.743362831858407 | 56 | 11 | 74.3 | 0 | 170 | 3 | 1 | 56 | WP_207689579.1 GMP reductase [Desulfonema limicola] | diamond | 168 | 96.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfonema | Desulfonema limicola | ||
| 29518273 | 29518273 | PRJNA876641_P_NODE_16110_length_251_cov_0.865169_g16036_i0 | PRJNA876641 | 16110 | 251 | 0.865169 | 2.17157419 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 141 | 7.42e-41 | NR | GJM17675.1 | 2202153 | g16036 | i0 | 80.7 | 4.9601593625498 | 83 | 16 | 99.2 | 0 | 2 | 250 | 8 | 90 | GJM17675.1 MAG: hypothetical protein DHS20C13_30020 [Thermodesulfobacteriota bacterium] | diamond | 1245 | 141 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 29644240 | 29644240 | PRJNA876641_P_NODE_16190_length_251_cov_0.865169_g16116_i0 | PRJNA876641 | 16190 | 251 | 0.865169 | 2.17157419 | Desulforhabdus sp. TSK | 2925014 | Bacteria | Bacteria | 70.1 | 6.22e-13 | NR | WP_244085865.1 | 2925014 | g16116 | i0 | 77.5 | 1.91235059760956 | 40 | 9 | 47.8 | 0 | 250 | 131 | 108 | 147 | WP_244085865.1 hypothetical protein [Desulforhabdus sp. TSK] | diamond | 480 | 70.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Desulforhabdus | Desulforhabdus sp. TSK | ||
| 29770807 | 29770807 | PRJNA876641_P_NODE_22791_length_242_cov_0.911243_g22717_i0 | PRJNA876641 | 22791 | 242 | 0.911243 | 2.20520806 | Desulfocurvibacter africanus | 873 | Bacteria | Bacteria | 92 | 5.3700000000000006e-21 | NR | WP_027368314.1 | 873 | g22717 | i0 | 62.2 | 3.68181818181818 | 74 | 27 | 90.5 | 1 | 224 | 6 | 4 | 77 | WP_027368314.1 NAD(P)H:quinone oxidoreductase [Desulfocurvibacter africanus] | diamond | 891 | 92 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfocurvibacter | Desulfocurvibacter africanus | ||
| 30181536 | 30181536 | PRJNA876641_P_NODE_11232_length_275_cov_1.519802_g11158_i0 | PRJNA876641 | 11232 | 275 | 1.519802 | 4.1794555 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 82.8 | 4.64e-16 | NR | KAF0221782.1 | 2282154 | g11158 | i0 | 45.6 | 3.89454545454545 | 90 | 49 | 98.2 | 0 | 272 | 3 | 1017 | 1106 | KAF0221782.1 MAG: hypothetical protein FD174_113 [Geobacteraceae bacterium] | diamond | 1071 | 82.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 30497660 | 30497660 | PRJNA876641_P_NODE_20293_length_245_cov_0.895349_g20219_i0 | PRJNA876641 | 20293 | 245 | 0.895349 | 2.19360505 | Desulfonema magnum | 45655 | Bacteria | Bacteria | 84.7 | 6.38e-17 | NR | WP_207683226.1 | 45655 | g20219 | i0 | 51.2 | 1.02857142857143 | 84 | 34 | 94.3 | 1 | 231 | 1 | 115 | 198 | WP_207683226.1 S8 family serine peptidase [Desulfonema magnum] | diamond | 252 | 84.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfonema | Desulfonema magnum | ||
| 31066554 | 31066554 | PRJNA876641_P_NODE_16115_length_251_cov_0.865169_g16041_i0 | PRJNA876641 | 16115 | 251 | 0.865169 | 2.17157419 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 68.9 | 2.42e-11 | NR | MEW6300529.1 | 2202153 | g16041 | i0 | 44.6 | 0.99203187250996006 | 83 | 45 | 99.2 | 1 | 250 | 2 | 444 | 525 | MEW6300529.1 multicopper oxidase family protein [Thermodesulfobacteriota bacterium] | diamond | 249 | 68.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 32434783 | 32434783 | PRJNA876641_P_NODE_8459_length_291_cov_2.041284_g8385_i0 | PRJNA876641 | 8459 | 291 | 2.041284 | 5.94013644 | root | 1 | Root_unresolved | Root_unresolved | 99 | 3.52e-22 | NR | WP_014809794.1 | 2358 | g8385 | i0 | 56.8 | 6.61855670103093 | 81 | 29 | 83.5 | 2 | 6 | 248 | 293 | 367 | WP_014809794.1 alkene reductase [Desulfomonile tiedjei] | diamond | 1926 | 99.8 | 0.991983967935872 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfomonilia | Desulfomonilales | Desulfomonilaceae | Desulfomonile | Desulfomonile tiedjei | ||
| 32686885 | 32686885 | PRJNA876641_P_NODE_21580_length_243_cov_0.905882_g21506_i0 | PRJNA876641 | 21580 | 243 | 0.905882 | 2.20129326 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 49.3 | 1.23e-4 | NR | WP_320353948.1 | 1940337 | g21506 | i0 | 51.3 | 1.09876543209877 | 39 | 19 | 48.1 | 0 | 225 | 109 | 168 | 206 | WP_320353948.1 DUF599 domain-containing protein [Desulfobotulus sp.] | diamond | 267 | 49.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobotulus | Desulfobotulus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;