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contig_metadata

11 rows where bioproject = "PRJNA876641" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 11 ✖

bioproject 1

  • PRJNA876641 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12332215 12332215 PRJNA876641_P_NODE_14690_length_256_cov_1.295082_g14616_i0 PRJNA876641 14690 256 1.295082 3.31540992 Halobaculum sp. CBA1158 2904243 Archaea Archaea 176 1.32e-39   NTclustered gi|2176093559|gb|CP090371.1| 2904243 g14616 i0 80.435 8.78125 230 45 90 0 4 233 1585525 1585754 Halobaculum sp. CBA1158 chromosome, complete genome blastn 2248 176 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum sp. CBA1158
21255234 21255234 PRJNA876641_P_NODE_19357_length_246_cov_1.335260_g19283_i0 PRJNA876641 19357 246 1.33526 3.2847396 Halomarina pelagica 2961599 Archaea Archaea 67.6 7.94e-7   NTclustered gi|2270305250|gb|CP100454.1| 2961599 g19283 i0 95.238 1.04065040650407 42 2 17 0 6 47 1375388 1375429 Halomarina pelagica strain BND7 chromosome, complete genome blastn 256 67.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina pelagica
28200082 28200082 PRJNA876641_P_NODE_24106_length_227_cov_2.766234_g24032_i0 PRJNA876641 24106 227 2.766234 6.27935118 root 1 Root_unresolved Root_unresolved 50.4 5.42e-5   NR WP_115883272.1 2077203 g24032 i0 35.1 1.784140969163 74 42 92.5 3 7 216 228 299 WP_115883272.1 oxidoreductase [Haloferax sp. Atlit-12N] diamond 405 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax sp. Atlit-12N
29392172 29392172 PRJNA876641_P_NODE_19569_length_246_cov_0.890173_g19495_i0 PRJNA876641 19569 246 0.890173 2.18982558 Thermoplasmatota archaeon 2806419 Archaea Archaea 48.1 3.92e-4   NR MEC9120395.1 2806419 g19495 i0 72.4 0.707317073170732 29 8 35.4 0 246 160 207 235 MEC9120395.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Thermoplasmatota archaeon] diamond 174 48.1 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29675906 29675906 PRJNA876641_P_NODE_13030_length_265_cov_1.333333_g12956_i0 PRJNA876641 13030 265 1.333333 3.53333245 Methanosarcinales archaeon 2250255 Archaea Archaea 54.3 4.04e-6   NR RYE83256.1 2250255 g12956 i0 34.9 0.939622641509434 83 52 91.7 1 244 2 150 232 RYE83256.1 MAG: hypothetical protein EOO65_04255 [Methanosarcinales archaeon] diamond 249 54.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30348152 30348152 PRJNA876641_P_NODE_14172_length_259_cov_0.876344_g14098_i0 PRJNA876641 14172 259 0.876344 2.26973096 root 1 Root_unresolved Root_unresolved 48.1 5.53e-4   NR WP_295594825.1 253161 g14098 i0 26.8 9.71814671814672 82 55 95 2 253 8 52 128 WP_295594825.1 PQQ-binding-like beta-propeller repeat protein [uncultured Methanobrevibacter sp.] diamond 2517 48.5 0.991752577319588 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30371629 30371629 PRJNA876641_P_NODE_10232_length_281_cov_1.043269_g10158_i0 PRJNA876641 10232 281 1.043269 2.93158589 Candidatus Hydrothermarchaeales archaeon 3107144 Archaea Archaea 51.6 3.65e-5   NR MFQ6137201.1 3107144 g10158 i0 38.8 3.73665480427046 85 35 90.7 3 262 8 186 253 MFQ6137201.1 prephenate dehydratase [Candidatus Hydrothermarchaeales archaeon] diamond 1050 51.6 1 Archaea   Methanobacteriati Candidatus Hydrothermarchaeota Candidatus Hydrothermarchaeia Candidatus Hydrothermarchaeales     Candidatus Hydrothermarchaeales archaeon
31287421 31287421 PRJNA876641_P_NODE_23915_length_233_cov_2.456250_g23841_i0 PRJNA876641 23915 233 2.45625 5.7230625 Thermoplasmatota archaeon 2806419 Archaea Archaea 43.9 0.00418   NR MEC7713334.1 2806419 g23841 i0 63.9 0.463519313304721 36 13 46.4 0 125 18 10 45 MEC7713334.1 hypothetical protein [Thermoplasmatota archaeon] diamond 108 43.9 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
31414113 31414113 PRJNA876641_P_NODE_13416_length_263_cov_1.278947_g13342_i0 PRJNA876641 13416 263 1.278947 3.36363061 Euryarchaeota archaeon RBG_19FT_COMBO_69_17 1797984 Archaea Archaea 94.7 9.9e-21   NR OGS62703.1 1797984 g13342 i0 56.7 3.07984790874525 67 29 76.4 0 263 63 307 373 OGS62703.1 MAG: copper oxidase [Euryarchaeota archaeon RBG_19FT_COMBO_69_17] diamond 810 94.7 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_19FT_COMBO_69_17
31477497 31477497 PRJNA876641_P_NODE_22736_length_242_cov_0.911243_g22662_i0 PRJNA876641 22736 242 0.911243 2.20520806 Candidatus Methanophagales archaeon 2056316 Archaea Archaea 41.2 0.0209   NR MCR5853007.1 2056316 g22662 i0 44.7 0.582644628099174 47 20 58.3 1 82 222 18 58 MCR5853007.1 hypothetical protein [Candidatus Methanophagales archaeon] diamond 141 41.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales     Candidatus Methanophagales archaeon
32899268 32899268 PRJNA876641_P_NODE_7400_length_307_cov_1.974359_g7326_i0 PRJNA876641 7400 307 1.974359 6.06128213 Methanopyrus 2319 Archaea Archaea 45.1 9.26e-4   NR WP_011019823.1 2319 g7326 i0 46.7 0.781758957654723 45 23 43 1 242 111 16 60 WP_011019823.1 MULTISPECIES: 30S ribosomal protein S27ae [Methanopyrus] diamond 240 45.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanopyri Methanopyrales Methanopyraceae Methanopyrus  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;