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contig_metadata

4 rows where bioproject = "PRJNA876641", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA876641 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26706763 26706763 PRJNA876641_P_NODE_11801_length_272_cov_1.105528_g11727_i0 PRJNA876641 11801 272 1.105528 3.00703616 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 48.9 3.63e-4   NR MBI5470944.1 2026749 g11727 i0 41.3 0.827205882352941 75 40 80.5 3 265 47 577 649 MBI5470944.1 hypothetical protein [Ignavibacteriota bacterium] diamond 225 48.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
26714737 26714737 PRJNA876641_P_NODE_15081_length_254_cov_1.276243_g15007_i0 PRJNA876641 15081 254 1.276243 3.24165722 Pseudomonadati 3379134 Bacteria Bacteria 75.5 1.29e-13   NR PLX33511.1 2053306 g15007 i0 48.9 4.03937007874016 88 38 98 2 3 251 1163 1248 PLX33511.1 MAG: hypothetical protein C0600_00325 [Ignavibacteria bacterium] diamond 1026 75.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28950278 28950278 PRJNA876641_P_NODE_8248_length_294_cov_1.393665_g8174_i0 PRJNA876641 8248 294 1.393665 4.0973751 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 58.9 8.42e-8   NR MCB0729235.1 2026749 g8174 i0 40.9 0.948979591836735 93 43 94.9 5 5 283 170 250 MCB0729235.1 5'/3'-nucleotidase SurE [Ignavibacteriota bacterium] diamond 279 58.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29486530 29486530 PRJNA876641_P_NODE_10110_length_281_cov_1.687500_g10036_i0 PRJNA876641 10110 281 1.6875 4.741875 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 124 8.04e-32   NR MBI3260468.1 2026749 g10036 i0 60.2 11.914590747331 93 37 99.3 0 1 279 102 194 MBI3260468.1 AAA family ATPase [Ignavibacteriota bacterium] diamond 3348 124 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;