RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA876641", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA876641 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31224104 31224104 PRJNA876641_P_NODE_14175_length_258_cov_3.643243_g14101_i0 PRJNA876641 14175 258 3.643243 9.39956694 Fidelibacterota bacterium 2026760 Bacteria Bacteria 115 9.62e-30   NR MFQ6605159.1 2026760 g14101 i0 69.9 1.93023255813953 83 22 96.5 2 256 8 149 228 MFQ6605159.1 SDR family oxidoreductase [Fidelibacterota bacterium] diamond 498 115 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32781327 32781327 PRJNA876641_P_NODE_17760_length_248_cov_1.760000_g17686_i0 PRJNA876641 17760 248 1.76 4.3648 FCB group 1783270 Bacteria Bacteria 81.3 3.58e-16   NR MFC1565613.1 2026760 g17686 i0 65.6 6.06048387096774 61 21 73.8 0 3 185 227 287 MFC1565613.1 DUF1295 domain-containing protein [Fidelibacterota bacterium] diamond 1503 81.6 0.996323529411765 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;