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contig_metadata

20 rows where bioproject = "PRJNA874604" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA874604 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3789642 3789642 PRJNA874604_P_NODE_11223_length_513_cov_1.368182_g10872_i0 PRJNA874604 11223 513 1.368182 7.01877366 Nitratidesulfovibrio 2802295 Bacteria Bacteria 448 5.479999999999999e-121   NTclustered gi|46451220|gb|AE017285.1| 882 g10872 i0 82.49 83.1500974658869 514 86 99 3 1 512 2097683 2097172 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome blastn 42656 448 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Nitratidesulfovibrio Nitratidesulfovibrio vulgaris
14879460 14879460 PRJNA874604_P_NODE_20392_length_400_cov_1.749235_g20040_i0 PRJNA874604 20392 400 1.749235 6.99694 Desulfobacterales bacterium 2044940 Bacteria Bacteria 57.8 4.08e-7   NR MBI5895368.1 2044940 g20040 i0 30.3 0.8925 119 82 89.3 1 395 39 79 196 MBI5895368.1 DUF2589 domain-containing protein [Desulfobacterales bacterium] diamond 357 57.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
20364101 20364101 PRJNA874604_P_NODE_19636_length_406_cov_1.375375_g19284_i0 PRJNA874604 19636 406 1.375375 5.5840225 Pseudomonadati 3379134 Bacteria Bacteria 529 1.4799999999999996e-145   NTclustered gi|84616844|emb|CT009609.1| 897 g19284 i0 91.237 34.3152709359606 388 34 96 0 1 388 33330 33717 Desulfococcus multivorans vrl island blastn 13932 529 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfococcus Desulfococcus multivorans
26706743 26706743 PRJNA874604_P_NODE_44841_length_295_cov_1.963964_g44489_i0 PRJNA874604 44841 295 1.963964 5.7936938 Desulfococcaceae bacterium HSG7 3055597 Bacteria Bacteria 79.7 5.97e-16   NR MDM8557158.1 3055597 g44489 i0 49.3 0.722033898305085 71 36 72.2 0 76 288 130 200 MDM8557158.1 hypothetical protein [Desulfococcaceae bacterium HSG7] diamond 213 79.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae   Desulfococcaceae bacterium HSG7
27031589 27031589 PRJNA874604_P_NODE_76502_length_249_cov_0.875000_g76150_i0 PRJNA874604 76502 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 79.3 4.85e-15   NR MEE9119683.1 3024410 g76150 i0 52.5 2.89156626506024 80 38 96.4 0 3 242 327 406 MEE9119683.1 hypothetical protein [Syntrophobacteria bacterium] diamond 720 80.1 0.990012484394507 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria       Syntrophobacteria bacterium
27434695 27434695 PRJNA874604_P_NODE_86003_length_245_cov_1.790698_g85651_i0 PRJNA874604 86003 245 1.790698 4.3872101 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 59.3 4.88e-8   NR MEW6220043.1 2202153 g85651 i0 47.6 1.43265306122449 63 33 77.1 0 232 44 238 300 MEW6220043.1 choice-of-anchor A family protein [Thermodesulfobacteriota bacterium] diamond 351 59.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27939766 27939766 PRJNA874604_P_NODE_92805_length_243_cov_0.905882_g92453_i0 PRJNA874604 92805 243 0.905882 2.20129326 Trichloromonas sp. 3069249 Bacteria Bacteria 43.1 0.0276   NR MDX9709033.1 3069249 g92453 i0 33.8 0.950617283950617 77 50 93.8 1 243 16 74 150 MDX9709033.1 AAA family ATPase [Trichloromonas sp.] diamond 231 43.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Trichloromonadaceae Trichloromonas Trichloromonas sp.
28200077 28200077 PRJNA874604_P_NODE_99326_length_241_cov_0.916667_g98974_i0 PRJNA874604 99326 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 43.5 0.019   NR WP_072905254.1 57040 g98974 i0 30.1 10.195020746888 83 46 88.4 2 230 18 334 416 WP_072905254.1 VIT domain-containing protein [Malonomonas rubra] diamond 2457 43.9 0.990888382687927 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geopsychrobacteraceae Malonomonas Malonomonas rubra
28223636 28223636 PRJNA874604_P_NODE_54466_length_276_cov_1.280788_g54114_i0 PRJNA874604 54466 276 1.280788 3.53497488 Desulfuromonas soudanensis 1603606 Bacteria Bacteria 131 7.23e-34   NR WP_279330578.1 1603606 g54114 i0 65.5 9.80434782608696 87 30 94.6 0 14 274 92 178 WP_279330578.1 asparagine--tRNA ligase [Desulfuromonas soudanensis] diamond 2706 131 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas soudanensis
28791953 28791953 PRJNA874604_P_NODE_39127_length_312_cov_1.104603_g38775_i0 PRJNA874604 39127 312 1.104603 3.44636136 Desulfovibrio sp. DV 1844708 Bacteria Bacteria 43.9 0.0289   NR WP_075352813.1 1844708 g38775 i0 37.7 0.740384615384615 77 35 67.3 3 35 244 105 175 WP_075352813.1 LysR family transcriptional regulator [Desulfovibrio sp. DV] diamond 231 43.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp. DV
29202729 29202729 PRJNA874604_P_NODE_59429_length_267_cov_1.288660_g59077_i0 PRJNA874604 59429 267 1.28866 3.4407222 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 62.8 3.64e-9   NR MEW6220043.1 2202153 g59077 i0 40 0.955056179775281 85 51 95.5 0 6 260 192 276 MEW6220043.1 choice-of-anchor A family protein [Thermodesulfobacteriota bacterium] diamond 255 62.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30718636 30718636 PRJNA874604_P_NODE_66094_length_255_cov_1.521978_g65742_i0 PRJNA874604 66094 255 1.521978 3.8810439 Desulfobacterales bacterium 2044940 Bacteria Bacteria 75.5 4.81e-14   NR MBS3732837.1 2044940 g65742 i0 50.8 2.45882352941176 65 31 76.5 1 12 206 177 240 MBS3732837.1 hypothetical protein [Desulfobacterales bacterium] diamond 627 75.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30813468 30813468 PRJNA874604_P_NODE_53774_length_277_cov_1.509804_g53422_i0 PRJNA874604 53774 277 1.509804 4.18215708 Desulfuromonadaceae bacterium 2099677 Bacteria Bacteria 43.5 0.0291   NR MDD2850619.1 2099677 g53422 i0 36.4 0.833935018050541 77 47 83.4 2 41 271 86 160 MDD2850619.1 MFS transporter [Desulfuromonadaceae bacterium] diamond 231 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae   Desulfuromonadaceae bacterium
30853152 30853152 PRJNA874604_P_NODE_35594_length_323_cov_1.544000_g35242_i0 PRJNA874604 35594 323 1.544 4.98712 Pseudomonadati 3379134 Bacteria Bacteria 133 3.18e-36   NR RUM35362.1 895 g35242 i0 64.6 14.5170278637771 99 34 92 1 319 23 110 207 RUM35362.1 MAG: hypothetical protein DSY50_04930 [Desulfobulbus sp.] diamond 4689 134 0.992537313432836 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus sp.
30908450 30908450 PRJNA874604_P_NODE_86634_length_245_cov_0.895349_g86282_i0 PRJNA874604 86634 245 0.895349 2.19360505 Desulfobulbaceae bacterium BRH_c16a 1629713 Bacteria Bacteria 89.7 4.99e-19   NR KJS02832.1 1629713 g86282 i0 66.7 0.771428571428571 63 21 77.1 0 196 8 5 67 KJS02832.1 MAG: hypothetical protein VR65_03850 [Desulfobulbaceae bacterium BRH_c16a] diamond 189 89.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium BRH_c16a
31603890 31603890 PRJNA874604_P_NODE_57076_length_271_cov_1.520202_g56724_i0 PRJNA874604 57076 271 1.520202 4.11974742 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 65.9 2.24e-10   NR MDQ1277081.1 2202153 g56724 i0 40.4 6.83025830258303 89 51 98.5 2 267 1 35 121 MDQ1277081.1 Peptidase [Thermodesulfobacteriota bacterium] diamond 1851 65.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31793370 31793370 PRJNA874604_P_NODE_48837_length_286_cov_1.887324_g48485_i0 PRJNA874604 48837 286 1.887324 5.39774664 Desulfobacterales bacterium 2044940 Bacteria Bacteria 138 8.3e-36   NR MBF0120447.1 2044940 g48485 i0 66.3 2.98951048951049 95 32 99.7 0 1 285 348 442 MBF0120447.1 methylaspartate mutase subunit E [Desulfobacterales bacterium] diamond 855 138 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31888390 31888390 PRJNA874604_P_NODE_56097_length_273_cov_1.335000_g55745_i0 PRJNA874604 56097 273 1.335 3.64455 Syntrophaceae bacterium 2052184 Bacteria Bacteria 85.9 3.43e-17   NR MBS3907990.1 2052184 g55745 i0 50 1.57142857142857 74 37 81.3 0 3 224 232 305 MBS3907990.1 mucoidy inhibitor MuiA family protein [Syntrophaceae bacterium] diamond 429 85.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
32458188 32458188 PRJNA874604_P_NODE_53039_length_278_cov_1.936585_g52687_i0 PRJNA874604 53039 278 1.936585 5.3837063 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 62.4 1.94e-9   NR MDA8418796.1 2049433 g52687 i0 59.6 1.01438848920863 47 19 50.7 0 121 261 4 50 MDA8418796.1 DUF2589 domain-containing protein [Desulfobacteraceae bacterium] diamond 282 62.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32875879 32875879 PRJNA874604_P_NODE_78540_length_248_cov_0.880000_g78188_i0 PRJNA874604 78540 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 43.5 0.0107   NR WP_028576579.1 29503 g78188 i0 32.1 2.83064516129032 78 51 94.4 1 234 1 6 81 WP_028576579.1 universal stress protein [Desulfomicrobium escambiense] diamond 702 43.9 0.990888382687927 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfomicrobiaceae Desulfomicrobium Desulfomicrobium escambiense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;