RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA874604" and tax_phylum = "Kitrinoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA874604 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8505041 8505041 PRJNA874604_P_NODE_54727_length_275_cov_1.856436_g54375_i0 PRJNA874604 54727 275 1.856436 5.105199 Allexivirus rehmanniae 3433729 Viruses Viruses 383 7.89e-102   NTclustered gi|2668627636|gb|PP097222.1| 3115597 g54375 i0 91.941 8.93454545454545 273 22 99 0 3 275 4588 4860 Rehmannia allexivirus isolate ReAV-Rg-2020-52, complete genome blastn 2457 383 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus rehmanniae
30403202 30403202 PRJNA874604_P_NODE_59293_length_267_cov_1.561856_g58941_i0 PRJNA874604 59293 267 1.561856 4.17015552 Skomarfal virus 47 3063349 Viruses Viruses 43.9 0.0191   NR WPR18547.1 3063349 g58941 i0 41.4 1.68539325842697 58 26 56.2 1 228 79 128 185 WPR18547.1 MAG: hypothetical protein [Skomarfal virus 47] diamond 450 43.9 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Skomarfal virus 47

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;