RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA874604" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA874604 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11055466 11055466 PRJNA874604_P_NODE_35969_length_322_cov_1.236948_g35617_i0 PRJNA874604 35969 322 1.236948 3.98297256 Arenicola marina 6344 Annelida Annelida 139 2.26e-28   NTclustered gi|158187777|gb|EU124973.1| 6344 g35617 i0 77.586 58.0496894409938 232 48 71 2 9 238 295 524 Arenicola marina ribosomal protein rpl23a mRNA, partial cds blastn 18692 139 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina
13606385 13606385 PRJNA874604_P_NODE_87171_length_245_cov_0.895349_g86819_i0 PRJNA874604 87171 245 0.895349 2.19360505 Hirudo verbana 311461 Annelida Annelida 132 2.76e-26   NTclustered gi|2918369616|emb|OZ237781.1| 311461 g86819 i0 95.181 0.338775510204082 83 4 34 0 163 245 9457500 9457418 Hirudo verbana genome assembly, chromosome: 3 blastn 83 132 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
13606484 13606484 PRJNA874604_P_NODE_91751_length_244_cov_0.894737_g91399_i0 PRJNA874604 91751 244 0.894737 2.18315828 Hirudo verbana 311461 Annelida Annelida 56.5 0.002   NTclustered gi|2918369621|emb|OZ237783.1| 311461 g91399 i0 100 0.364754098360656 30 0 12 0 139 168 13017538 13017567 Hirudo verbana genome assembly, chromosome: 5 blastn 89 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
17429996 17429996 PRJNA874604_P_NODE_40014_length_309_cov_1.631356_g39662_i0 PRJNA874604 40014 309 1.631356 5.04089004 Owenia fusiformis 6347 Annelida Annelida 109 6.630000000000001e-26   NR CAH1773728.1 6347 g39662 i0 48.5 1 103 49 96.1 1 308 12 300 402 CAH1773728.1 unnamed protein product, partial [Owenia fusiformis] diamond 309 109 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
21254840 21254840 PRJNA874604_P_NODE_88837_length_245_cov_0.866279_g88485_i0 PRJNA874604 88837 245 0.866279 2.12238355 Hirudo verbana 311461 Annelida Annelida 54.7 0.006   NTclustered gi|2918369616|emb|OZ237781.1| 311461 g88485 i0 100 0.355102040816327 29 0 12 0 27 55 2229992 2229964 Hirudo verbana genome assembly, chromosome: 3 blastn 87 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
25077807 25077807 PRJNA874604_P_NODE_35560_length_323_cov_1.808000_g35208_i0 PRJNA874604 35560 323 1.808 5.83984 Helobdella robusta 6412 Annelida Annelida 155 4.78e-45   NR XP_009019956.1 6412 g35208 i0 72 47.1733746130031 107 30 99.4 0 2 322 95 201 XP_009019956.1 hypothetical protein HELRODRAFT_161829 [Helobdella robusta] diamond 15237 155 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
25078388 25078388 PRJNA874604_P_NODE_65620_length_256_cov_1.360656_g65268_i0 PRJNA874604 65620 256 1.360656 3.48327936 Ailoscolex lacteospumosus 1046305 Annelida Annelida 58.4 5e-4   NTclustered gi|2920003608|emb|OZ238872.1| 1046305 g65268 i0 97.059 5.05078125 34 1 13 0 53 86 6507785 6507818 Ailoscolex lacteospumosus genome assembly, chromosome: 13 blastn 1293 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
26643550 26643550 PRJNA874604_P_NODE_36221_length_321_cov_1.241935_g35869_i0 PRJNA874604 36221 321 1.241935 3.98661135 Paralvinella palmiformis 53620 Annelida Annelida 82.8 8.46e-16   NR KAK2161192.1 53620 g35869 i0 36.5 2.05607476635514 115 65 100 1 1 321 204 318 KAK2161192.1 hypothetical protein LSH36_120g11029 [Paralvinella palmiformis] diamond 660 82.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
27094889 27094889 PRJNA874604_P_NODE_37682_length_316_cov_1.806584_g37330_i0 PRJNA874604 37682 316 1.806584 5.70880544 Metazoa 33208 Annelida Annelida 100 3.4000000000000003e-22   NR CAH1801949.1 6347 g37330 i0 50.5 1.82278481012658 99 45 94 1 6 302 432 526 CAH1801949.1 unnamed protein product [Owenia fusiformis] diamond 576 100 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
29107976 29107976 PRJNA874604_P_NODE_89688_length_244_cov_0.900585_g89336_i0 PRJNA874604 89688 244 0.900585 2.1974274 Paralvinella palmiformis 53620 Annelida Annelida 40.4 0.0409   NR KAK2156626.1 53620 g89336 i0 43.5 0.565573770491803 46 25 55.3 1 152 18 23 68 KAK2156626.1 hypothetical protein LSH36_208g00000 [Paralvinella palmiformis] diamond 138 40.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
29210828 29210828 PRJNA874604_P_NODE_63069_length_260_cov_2.106952_g62717_i0 PRJNA874604 63069 260 2.106952 5.4780752 Opisthokonta 33154 Annelida Annelida 45.1 0.00721   NR KAK2165061.1 53620 g62717 i0 30.1 2.91923076923077 83 50 90 2 236 3 1163 1242 KAK2165061.1 hypothetical protein LSH36_55g03001 [Paralvinella palmiformis] diamond 759 45.4 0.993392070484582 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
29242274 29242274 PRJNA874604_P_NODE_73029_length_250_cov_0.870056_g72677_i0 PRJNA874604 73029 250 0.870056 2.17514 Metazoa 33208 Annelida Annelida 128 2.89e-34   NR ELT97074.1 283909 g72677 i0 70.2 9.06 84 24 99.6 1 1 249 82 165 ELT97074.1 hypothetical protein CAPTEDRAFT_151499 [Capitella teleta] diamond 2265 129 0.992248062015504 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
29557824 29557824 PRJNA874604_P_NODE_97290_length_242_cov_0.911243_g96938_i0 PRJNA874604 97290 242 0.911243 2.20520806 Metazoa 33208 Annelida Annelida 91.7 1.04e-21   NR CAH1787134.1 6347 g96938 i0 70.4 9.02479338842975 71 21 88 0 214 2 1 71 CAH1787134.1 unnamed protein product [Owenia fusiformis] diamond 2184 92.4 0.992424242424242 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
30023798 30023798 PRJNA874604_P_NODE_11671_length_504_cov_2.858469_g11320_i0 PRJNA874604 11671 504 2.858469 14.40668376 Paralvinella palmiformis 53620 Annelida Annelida 139 4.849999999999999e-37   NR KAK2142741.1 53620 g11320 i0 64.8 2.20238095238095 122 41 71.4 2 360 1 168 289 KAK2142741.1 hypothetical protein LSH36_919g01064 [Paralvinella palmiformis] diamond 1110 139 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
30244945 30244945 PRJNA874604_P_NODE_67072_length_253_cov_1.711111_g66720_i0 PRJNA874604 67072 253 1.711111 4.32911083 Owenia fusiformis 6347 Annelida Annelida 57 2.2e-7   NR CAH1798685.1 6347 g66720 i0 42.9 0.99604743083004 84 45 99.6 1 252 1 82 162 CAH1798685.1 unnamed protein product [Owenia fusiformis] diamond 252 57 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
30758438 30758438 PRJNA874604_P_NODE_71414_length_250_cov_1.305085_g71062_i0 PRJNA874604 71414 250 1.305085 3.2627125 Metazoa 33208 Annelida Annelida 83.2 1.4e-16   NR XP_009012070.1 6412 g71062 i0 64.6 3.9 65 21 75.6 1 1 189 299 363 XP_009012070.1 hypothetical protein HELRODRAFT_185327 [Helobdella robusta] diamond 975 83.6 0.995215311004785 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
30845183 30845183 PRJNA874604_P_NODE_75714_length_249_cov_0.875000_g75362_i0 PRJNA874604 75714 249 0.875 2.17875 Helobdella robusta 6412 Annelida Annelida 69.3 1.82e-11   NR XP_009018294.1 6412 g75362 i0 41.6 1.91566265060241 77 45 92.8 0 231 1 1038 1114 XP_009018294.1 hypothetical protein HELRODRAFT_191944 [Helobdella robusta] diamond 477 69.3 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
32426452 32426452 PRJNA874604_P_NODE_42259_length_303_cov_1.004348_g41907_i0 PRJNA874604 42259 303 1.004348 3.04317444 Capitella teleta 283909 Annelida Annelida 86.3 3.94e-17   NR ELU05692.1 283909 g41907 i0 46.3 2.84158415841584 95 50 94.1 1 302 18 602 695 ELU05692.1 hypothetical protein CAPTEDRAFT_168822 [Capitella teleta] diamond 861 86.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
32489866 32489866 PRJNA874604_P_NODE_81539_length_247_cov_0.885057_g81187_i0 PRJNA874604 81539 247 0.885057 2.18609079 Capitella teleta 283909 Annelida Annelida 59.7 4.32e-8   NR ELT87809.1 283909 g81187 i0 59.6 0.631578947368421 52 21 63.2 0 166 11 1922 1973 ELT87809.1 hypothetical protein CAPTEDRAFT_215541 [Capitella teleta] diamond 156 59.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
32497957 32497957 PRJNA874604_P_NODE_85979_length_245_cov_1.790698_g85627_i0 PRJNA874604 85979 245 1.790698 4.3872101 Opisthokonta 33154 Annelida Annelida 57.4 2.31e-8   NR KAI0227703.1 104711 g85627 i0 63.4 2.42448979591837 41 14 50.2 1 124 2 6 45 KAI0227703.1 Eukaryotic translation initiation factor eIF1 [Lamellibrachia satsuma] diamond 594 57.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
32616027 32616027 PRJNA874604_P_NODE_86800_length_245_cov_0.895349_g86448_i0 PRJNA874604 86800 245 0.895349 2.19360505 Lamellibrachia satsuma 104711 Annelida Annelida 43.1 0.0285   NR KAI0239940.1 104711 g86448 i0 60.7 0.342857142857143 28 11 34.3 0 105 22 465 492 KAI0239940.1 Protein FAM13A [Lamellibrachia satsuma] diamond 84 43.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;