RNAquarium Metadata Server
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contig_metadata

16 rows where bioproject = "PRJNA874604", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 16 ✖

tax_kingdom 1

  • Orthornavirae · 16 ✖

bioproject 1

  • PRJNA874604 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3789788 3789788 PRJNA874604_P_NODE_3083_length_885_cov_2.293103_g2816_i0 PRJNA874604 3083 885 2.293103 20.29396155 Orthorubulavirus 2560195 Viruses Viruses 1613 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g2816 i0 99.548 80.8576271186441 885 4 100 0 1 885 952 68 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 71559 1613 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
3789893 3789893 PRJNA874604_P_NODE_43983_length_298_cov_1.026667_g43631_i0 PRJNA874604 43983 298 1.026667 3.05946766 Alphainfluenzavirus 197911 Viruses Viruses 551 2.239999999999999e-152   NTclustered gi|1387672470|gb|MH305898.1| 11320 g43631 i0 100 100 298 0 100 0 1 298 1842 1545 Influenza A virus (A/New Hampshire/19/2018(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence blastn 29800 551 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
3789985 3789985 PRJNA874604_P_NODE_5303_length_702_cov_2.815580_g4987_i0 PRJNA874604 5303 702 2.81558 19.7653716 Orthorubulavirus 2560195 Viruses Viruses 1291 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g4987 i0 99.858 68.8376068376068 702 1 100 0 1 702 3819 3118 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 48324 1291 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
5065915 5065915 PRJNA874604_P_NODE_33264_length_331_cov_2.724806_g32912_i0 PRJNA874604 33264 331 2.724806 9.01910786 Orthorubulavirus 2560195 Viruses Viruses 606 5.299999999999998e-169   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g32912 i0 99.698 69 331 1 100 0 1 331 4115 3785 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 22839 606 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
5065936 5065936 PRJNA874604_P_NODE_3564_length_833_cov_2.793421_g3283_i0 PRJNA874604 3564 833 2.793421 23.26919693 Orthorubulavirus 2560195 Viruses Viruses 1517 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g3283 i0 99.52 71.2641056422569 833 4 100 0 1 833 1748 916 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 59363 1517 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
7615790 7615790 PRJNA874604_P_NODE_1986_length_1070_cov_1.716148_g1768_i0 PRJNA874604 1986 1070 1.716148 18.3627836 Orthorubulavirus 2560195 Viruses Viruses 1960 0   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g1768 i0 99.72 97.9672897196262 1070 3 100 0 1 1070 391 1460 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 104825 1960 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10166352 10166352 PRJNA874604_P_NODE_19248_length_409_cov_1.750000_g18896_i0 PRJNA874604 19248 409 1.75 7.1575 Orthorubulavirus 2560195 Viruses Viruses 739 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g18896 i0 99.267 83.9902200488998 409 3 100 0 1 409 7251 6843 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 34352 745 0.991946308724832 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10166667 10166667 PRJNA874604_P_NODE_57548_length_270_cov_1.563452_g57196_i0 PRJNA874604 57548 270 1.563452 4.2213204 Orthorubulavirus 2560195 Viruses Viruses 446 9.719999999999998e-121   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g57196 i0 100 64.4851851851852 241 0 89 0 30 270 12778 12538 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 17411 446 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13992007 13992007 PRJNA874604_P_NODE_65011_length_257_cov_1.456522_g64659_i0 PRJNA874604 65011 257 1.456522 3.74326154 Orthorubulavirus 2560195 Viruses Viruses 464 2.5299999999999998e-126   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g64659 i0 99.225 68.15953307393 258 1 100 1 1 257 9683 9940 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 17517 464 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
15266255 15266255 PRJNA874604_P_NODE_88712_length_245_cov_0.895349_g88360_i0 PRJNA874604 88712 245 0.895349 2.19360505 Orthorubulavirus 2560195 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g88360 i0 100 68.9959183673469 245 0 100 0 1 245 10654 10410 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 16904 453 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
16540441 16540441 PRJNA874604_P_NODE_35233_length_324_cov_2.211155_g34881_i0 PRJNA874604 35233 324 2.211155 7.1641422 Orthorubulavirus 2560195 Viruses Viruses 588 1.88e-163   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g34881 i0 99.383 78.2438271604938 324 2 100 0 1 324 8059 8382 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 25351 593 0.991568296795953 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
19978045 19978045 PRJNA874604_P_NODE_16896_length_431_cov_2.195531_g16544_i0 PRJNA874604 16896 431 2.195531 9.46273861 Orthorubulavirus mammalis 3052558 Viruses Viruses 785 0   NTclustered gi|1028325827|gb|KX060176.1| 2905673 g16544 i0 99.536 85.0324825986079 431 2 100 0 1 431 2688 2258 Parainfluenza virus 5 strain AGS, complete genome blastn 36649 785 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
20364159 20364159 PRJNA874604_P_NODE_26676_length_360_cov_1.599303_g26324_i0 PRJNA874604 26676 360 1.599303 5.7574908 Orthorubulavirus 2560195 Viruses Viruses 660 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g26324 i0 99.722 96.9027777777778 360 1 100 0 1 360 4517 4876 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 34885 665 0.992481203007519 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
22915415 22915415 PRJNA874604_P_NODE_11838_length_501_cov_3.654206_g11487_i0 PRJNA874604 11838 501 3.654206 18.30757206 Orthorubulavirus 2560195 Viruses Viruses 909 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g11487 i0 99.401 81.435129740519 501 3 100 0 1 501 1801 2301 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 40799 909 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24189358 24189358 PRJNA874604_P_NODE_28659_length_350_cov_3.335740_g28307_i0 PRJNA874604 28659 350 3.33574 11.67509 Orthorubulavirus 2560195 Viruses Viruses 647 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g28307 i0 100 85.9542857142857 350 0 100 0 1 350 3031 2682 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 30084 647 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
31920166 31920166 PRJNA874604_P_NODE_57837_length_270_cov_1.172589_g57485_i0 PRJNA874604 57837 270 1.172589 3.1659903 Orthomarburgvirus marburgense 3052505 Viruses Viruses 183 2.53e-51   NR AAR85459.1 3052505 g57485 i0 100 3.95555555555556 89 0 98.9 0 268 2 1186 1274 AAR85459.1 L protein [Orthomarburgvirus marburgense] diamond 1068 183 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Filoviridae Orthomarburgvirus Orthomarburgvirus marburgense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;