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contig_metadata

14 rows where bioproject = "PRJNA874604" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 14 ✖

bioproject 1

  • PRJNA874604 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2127510 2127510 PRJNA874604_P_NODE_59362_length_267_cov_1.407216_g59010_i0 PRJNA874604 59362 267 1.407216 3.75726672 Haladaptatus halobius 2884875 Archaea Archaea 195 3.84e-45   NTclustered gi|2124335437|gb|CP085336.1| 2884875 g59010 i0 80.075 8.8689138576779 266 49 99 4 4 267 751820 752083 Haladaptatus halobius strain PSR5 chromosome 2, complete sequence blastn 2368 195 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus halobius
13991989 13991989 PRJNA874604_P_NODE_62711_length_261_cov_1.569149_g62359_i0 PRJNA874604 62711 261 1.569149 4.09547889 Methanocaldococcus 196118 Archaea Archaea 60.2 1.42e-4   NTclustered gi|103488854|gb|DQ516907.1| 2190 g62359 i0 100 0.245210727969349 32 0 12 0 230 261 69 38 Methanocaldococcus jannaschii spike-in control MJ-8000-191 genomic sequence blastn 64 60.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus jannaschii
26706757 26706757 PRJNA874604_P_NODE_80521_length_247_cov_0.885057_g80169_i0 PRJNA874604 80521 247 0.885057 2.18609079 Methanosarcinales archaeon 2250255 Archaea Archaea 41.2 0.0276   NR MCK5109419.1 2250255 g80169 i0 36.4 0.534412955465587 44 28 53.4 0 66 197 17 60 MCK5109419.1 hypothetical protein [Methanosarcinales archaeon] diamond 132 41.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27505873 27505873 PRJNA874604_P_NODE_81083_length_247_cov_0.885057_g80731_i0 PRJNA874604 81083 247 0.885057 2.18609079 root 1 Root_unresolved Root_unresolved 42.7 0.0363   NR MBR3156603.1 66852 g80731 i0 36 2.36842105263158 75 38 91.1 2 233 9 156 220 MBR3156603.1 hypothetical protein [Methanobrevibacter sp.] diamond 585 43.1 0.990719257540603 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28129194 28129194 PRJNA874604_P_NODE_75145_length_249_cov_0.875000_g74793_i0 PRJNA874604 75145 249 0.875 2.17875 Methanospirillum sp. 45200 Archaea Archaea 45.1 0.00522   NR HWQ67247.1 45200 g74793 i0 50.8 0.710843373493976 59 20 68.7 2 242 72 184 235 HWQ67247.1 hypothetical protein [Methanospirillum sp.] diamond 177 45.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum sp.
28191983 28191983 PRJNA874604_P_NODE_55946_length_273_cov_1.540000_g55594_i0 PRJNA874604 55946 273 1.54 4.2042 Natrinema ejinorense 373386 Archaea Archaea 43.1 0.039   NR WP_097379368.1 373386 g55594 i0 38.3 0.659340659340659 60 37 65.9 0 226 47 93 152 WP_097379368.1 amino acid permease [Natrinema ejinorense] diamond 180 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema ejinorense
29612705 29612705 PRJNA874604_P_NODE_60150_length_266_cov_1.020725_g59798_i0 PRJNA874604 60150 266 1.020725 2.7151285 Halovenus sp. 1954478 Archaea Archaea 72.4 1.68e-12   NR MFT4944476.1 1954478 g59798 i0 41.9 1.66917293233083 74 42 82.3 1 259 41 109 182 MFT4944476.1 diacylglycerol O-acyltransferase [Halovenus sp.] diamond 444 72.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halovenus Halovenus sp.
30497639 30497639 PRJNA874604_P_NODE_48453_length_287_cov_1.439252_g48101_i0 PRJNA874604 48453 287 1.439252 4.13065324 Methanobacteriota archaeon 2026739 Archaea Archaea 58.2 1.04e-7   NR MBR95856.1 2026739 g48101 i0 44.6 1.60975609756098 74 36 76.3 3 274 56 2 71 MBR95856.1 thiopurine S-methyltransferase [Methanobacteriota archaeon] diamond 462 58.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30592272 30592272 PRJNA874604_P_NODE_97133_length_242_cov_0.911243_g96781_i0 PRJNA874604 97133 242 0.911243 2.20520806 Methanosarcina sp. 2213 Archaea Archaea 49.3 1.82e-5   NR HET8687115.1 2213 g96781 i0 42.5 0.495867768595041 40 21 49.6 1 239 120 32 69 HET8687115.1 hypothetical protein [Methanosarcina sp.] diamond 120 49.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30623773 30623773 PRJNA874604_P_NODE_81173_length_247_cov_0.885057_g80821_i0 PRJNA874604 81173 247 0.885057 2.18609079 Haloplanus sp. XH21 2934938 Archaea Archaea 41.2 0.0339   NR WP_345779736.1 2934938 g80821 i0 41.3 0.910931174089069 75 40 87.4 2 216 1 2 75 WP_345779736.1 heavy-metal-associated domain-containing protein [Haloplanus sp. XH21] diamond 225 41.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus halobius
30916544 30916544 PRJNA874604_P_NODE_88854_length_245_cov_0.860465_g88502_i0 PRJNA874604 88854 245 0.860465 2.10813925 Methanocaldococcaceae 196117 Archaea Archaea 43.1 0.0267   NR WP_013799082.1 2189 g88502 i0 30.7 1.62857142857143 75 51 90.6 1 245 24 238 312 WP_013799082.1 mechanosensitive ion channel family protein [Methanotorris igneus] diamond 399 43.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanotorris Methanotorris igneus
31192287 31192287 PRJNA874604_P_NODE_87035_length_245_cov_0.895349_g86683_i0 PRJNA874604 87035 245 0.895349 2.19360505 Methanoregulaceae archaeon 2485498 Archaea Archaea 65.1 5.08e-10   NR HNJ81026.1 2485498 g86683 i0 45.8 0.722448979591837 59 30 72.2 1 69 245 603 659 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 177 65.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
31414100 31414100 PRJNA874604_P_NODE_79636_length_248_cov_0.880000_g79284_i0 PRJNA874604 79636 248 0.88 2.1824 Methanoregula sp. 2052170 Archaea Archaea 50.1 1.06e-4   NR WP_373007287.1 2052170 g79284 i0 43.3 0.810483870967742 67 28 78.6 3 46 240 126 184 WP_373007287.1 TIGR03768 family metallophosphoesterase [Methanoregula sp.] diamond 201 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32616028 32616028 PRJNA874604_P_NODE_87800_length_245_cov_0.895349_g87448_i0 PRJNA874604 87800 245 0.895349 2.19360505 Haloarcula saliterrae 2950534 Archaea Archaea 64.3 9.32e-10   NR WP_310921739.1 2950534 g87448 i0 43.2 0.906122448979592 74 40 90.6 1 229 8 120 191 WP_310921739.1 type I restriction-modification system subunit M [Haloarcula saliterrae] diamond 222 64.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula saliterrae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;