RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA874604", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 4 ✖

bioproject 1

  • PRJNA874604 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4679773 4679773 PRJNA874604_P_NODE_14724_length_457_cov_2.247396_g14372_i0 PRJNA874604 14724 457 2.247396 10.27059972 Inoviridae sp. 2219103 Viruses Viruses 785 0   NTclustered gi|2058097480|tpg|BK033507.1| 2219103 g14372 i0 99.309 134.326039387309 434 3 95 0 7 440 8502 8069 MAG TPA_asm: Inoviridae sp. isolate ct7Qh16, partial genome blastn 61387 785 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
16154714 16154714 PRJNA874604_P_NODE_51453_length_281_cov_1.788462_g51101_i0 PRJNA874604 51453 281 1.788462 5.02557822 Inoviridae sp. 2219103 Viruses Viruses 472 1.6799999999999998e-128   NTclustered gi|2058097480|tpg|BK033507.1| 2219103 g51101 i0 98.513 3.9288256227758 269 1 95 1 16 281 10578 10846 MAG TPA_asm: Inoviridae sp. isolate ct7Qh16, partial genome blastn 1104 472 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
17429647 17429647 PRJNA874604_P_NODE_19334_length_408_cov_2.668657_g18982_i0 PRJNA874604 19334 408 2.668657 10.88812056 Inoviridae sp. 2219103 Viruses Viruses 706 0   NTclustered gi|2058097480|tpg|BK033507.1| 2219103 g18982 i0 98.985 11.8357843137255 394 4 97 0 15 408 9009 8616 MAG TPA_asm: Inoviridae sp. isolate ct7Qh16, partial genome blastn 4829 706 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
25077402 25077402 PRJNA874604_P_NODE_1060_length_1374_cov_1.859339_g917_i0 PRJNA874604 1060 1374 1.859339 25.54731786 Inoviridae sp. 2219103 Viruses Viruses 2326 0   NTclustered gi|2058097480|tpg|BK033507.1| 2219103 g917 i0 97.709 213.569868995633 1353 30 98 1 22 1374 123 1474 MAG TPA_asm: Inoviridae sp. isolate ct7Qh16, partial genome blastn 293445 2326 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;