RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA874604", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA874604 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4681195 4681195 PRJNA874604_P_NODE_89384_length_244_cov_1.350877_g89032_i0 PRJNA874604 89384 244 1.350877 3.29613988 Fungi 4751 Fungi Fungi 141 1.26e-37   NR EPZ31141.1 988480 g89032 i0 85 13.7704918032787 80 12 98.4 0 3 242 67 146 EPZ31141.1 V-type proton ATPase subunit B [Rozella allomycis CSF55] diamond 3360 141 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
11056091 11056091 PRJNA874604_P_NODE_6769_length_634_cov_3.221034_g6431_i0 PRJNA874604 6769 634 3.221034 20.42135556 Rozella allomycis CSF55 988480 Fungi Fungi 330 1.08e-104   NR RKP16771.1 988480 g6431 i0 73.9 11.981072555205 211 55 99.8 0 634 2 559 769 RKP16771.1 P-loop containing nucleoside triphosphate hydrolase protein, partial [Rozella allomycis CSF55] diamond 7596 330 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28160848 28160848 PRJNA874604_P_NODE_75165_length_249_cov_0.875000_g74813_i0 PRJNA874604 75165 249 0.875 2.17875 Rozella allomycis CSF55 988480 Fungi Fungi 77.4 2.49e-14   NR EPZ31124.1 988480 g74813 i0 48.6 0.867469879518072 72 37 86.7 0 217 2 183 254 EPZ31124.1 Actin-binding FH2 domain-containing protein [Rozella allomycis CSF55] diamond 216 77.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29044888 29044888 PRJNA874604_P_NODE_5428_length_695_cov_4.390675_g5108_i0 PRJNA874604 5428 695 4.390675 30.51519125 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 169 4.22e-44   NR PJF16975.1 1246581 g5108 i0 47.8 1.86906474820144 207 92 83.3 8 83 661 31 235 PJF16975.1 hypothetical protein PSACC_03218 [Paramicrosporidium saccamoebae] diamond 1299 169 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;