RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA874604", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA874604 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31066535 31066535 PRJNA874604_P_NODE_71395_length_250_cov_1.350282_g71043_i0 PRJNA874604 71395 250 1.350282 3.375705 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 48.5 3.72e-4   NR MCD6508158.1 2026781 g71043 i0 37.5 0.96 80 46 96 2 241 2 327 402 MCD6508158.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Poribacteria bacterium] diamond 240 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31793366 31793366 PRJNA874604_P_NODE_41577_length_305_cov_0.987069_g41225_i0 PRJNA874604 41577 305 0.987069 3.01056045 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 44.7 0.0148   NR MYB94984.1 2026781 g41225 i0 42.6 0.924590163934426 47 27 46.2 0 69 209 7 53 MYB94984.1 homoserine kinase [Candidatus Poribacteria bacterium] diamond 282 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;