RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA874604", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA874604 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29423396 29423396 PRJNA874604_P_NODE_65549_length_256_cov_1.502732_g65197_i0 PRJNA874604 65549 256 1.502732 3.84699392 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 57 3.1e-7   NR MCK6555379.1 2838779 g65197 i0 47.3 0.8671875 74 32 86.7 2 256 35 56 122 MCK6555379.1 alpha/beta hydrolase [Candidatus Binatia bacterium] diamond 222 57 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30466288 30466288 PRJNA874604_P_NODE_85133_length_246_cov_0.890173_g84781_i0 PRJNA874604 85133 246 0.890173 2.18982558 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 125 4.32e-33   NR HXW82787.1 2785449 g84781 i0 62 3.8780487804878 79 30 96.3 0 1 237 32 110 HXW82787.1 alpha/beta hydrolase [Candidatus Binataceae bacterium] diamond 954 125 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;