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contig_metadata

18 rows where bioproject = "PRJNA874604" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 18 ✖

bioproject 1

  • PRJNA874604 · 18 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2126972 2126972 PRJNA874604_P_NODE_29802_length_345_cov_1.724265_g29450_i0 PRJNA874604 29802 345 1.724265 5.94871425 Thecamonas trahens 529818 Root_unresolved Root_unresolved 52.8 0.033   NTclustered gi|923131822|ref|XM_013903923.1| 461836 g29450 i0 100 0.0811594202898551 28 0 8 0 112 139 563 590 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_02458), partial mRNA blastn 28 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
3402782 3402782 PRJNA874604_P_NODE_51903_length_280_cov_3.067633_g51551_i0 PRJNA874604 51903 280 3.067633 8.5893724 Thecamonas trahens 529818 Root_unresolved Root_unresolved 124 5.39e-24   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g51551 i0 79.581 1.175 191 25 65 10 1 181 384 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 329 124 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5955506 5955506 PRJNA874604_P_NODE_59105_length_267_cov_2.180412_g58753_i0 PRJNA874604 59105 267 2.180412 5.82170004 Thecamonas trahens 529818 Root_unresolved Root_unresolved 315 2.82e-81   NTclustered gi|923133736|ref|XM_013904880.1| 461836 g58753 i0 88.716 96.6591760299626 257 29 96 0 11 267 389 133 Thecamonas trahens ATCC 50062 ADP-ribosylation factor 1 (AMSG_02990), mRNA blastn 25808 315 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6341758 6341758 PRJNA874604_P_NODE_22265_length_387_cov_0.980892_g21913_i0 PRJNA874604 22265 387 0.980892 3.79605204 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 99.4 6.190000000000001e-22   NR XP_013760592.1 461836 g21913 i0 62 1.75193798449612 79 29 60.5 1 384 151 262 340 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 678 99.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16155213 16155213 PRJNA874604_P_NODE_7613_length_604_cov_1.794727_g7272_i0 PRJNA874604 7613 604 1.794727 10.84015108 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 215 1.1000000000000001e-65   NR XP_013760592.1 461836 g7272 i0 65.4 0.804635761589404 162 54 80.5 1 604 119 181 340 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 486 215 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
25077453 25077453 PRJNA874604_P_NODE_14240_length_464_cov_1.877238_g13888_i0 PRJNA874604 14240 464 1.877238 8.71038432 Thecamonas trahens 529818 Root_unresolved Root_unresolved 281 5.28e-71   NTclustered gi|923136081|ref|XM_013906052.1| 461836 g13888 i0 79.412 63.1400862068966 408 76 87 8 5 408 24 427 Thecamonas trahens ATCC 50062 60S ribosomal protein L10-B (AMSG_01453), mRNA blastn 29297 281 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26706751 26706751 PRJNA874604_P_NODE_67341_length_253_cov_1.283333_g66989_i0 PRJNA874604 67341 253 1.283333 3.24683249 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 59.3 6.11e-8   NR XP_013760817.1 461836 g66989 i0 41.7 0.99604743083004 84 42 98.4 2 3 251 1416 1493 XP_013760817.1 alpha-actinin A [Thecamonas trahens ATCC 50062] diamond 252 59.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27118216 27118216 PRJNA874604_P_NODE_67642_length_252_cov_1.720670_g67290_i0 PRJNA874604 67642 252 1.72067 4.3360884 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 45.8 0.00178   NR XP_013757154.1 461836 g67290 i0 46.6 0.69047619047619 58 31 69 0 177 4 104 161 XP_013757154.1 uncharacterized protein AMSG_05741 [Thecamonas trahens ATCC 50062] diamond 174 45.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27371588 27371588 PRJNA874604_P_NODE_40363_length_308_cov_1.744681_g40011_i0 PRJNA874604 40363 308 1.744681 5.37361748 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 77.4 3.2e-16   NR XP_013759539.1 461836 g40011 i0 56.5 1.36363636363636 69 26 67.2 2 102 308 4 68 XP_013759539.1 cytochrome b5 [Thecamonas trahens ATCC 50062] diamond 420 77.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28831673 28831673 PRJNA874604_P_NODE_63908_length_259_cov_1.365591_g63556_i0 PRJNA874604 63908 259 1.365591 3.53688069 root 1 Root_unresolved Root_unresolved 43.9 0.0186   NR XP_013761218.1 461836 g63556 i0 32.3 2.06177606177606 93 50 97.3 4 253 2 485 573 XP_013761218.1 uncharacterized protein AMSG_02198 [Thecamonas trahens ATCC 50062] diamond 534 43.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28918244 28918244 PRJNA874604_P_NODE_96028_length_242_cov_0.911243_g95676_i0 PRJNA874604 96028 242 0.911243 2.20520806 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 71.2 3.22e-12   NR XP_013752865.1 461836 g95676 i0 43.8 0.991735537190083 80 44 97.9 1 240 4 86 165 XP_013752865.1 Mboat2 protein [Thecamonas trahens ATCC 50062] diamond 240 71.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29265542 29265542 PRJNA874604_P_NODE_13209_length_479_cov_1.339901_g12857_i0 PRJNA874604 13209 479 1.339901 6.41812579 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 66.6 2.35e-9   NR XP_013757898.1 461836 g12857 i0 36.4 0.876826722338205 140 73 86.4 7 62 475 3046 3171 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 420 66.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29360535 29360535 PRJNA874604_P_NODE_99749_length_241_cov_0.916667_g99397_i0 PRJNA874604 99749 241 0.916667 2.20916747 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 87 9.09e-18   NR XP_013759182.1 461836 g99397 i0 57.7 0.970954356846473 78 32 97.1 1 5 238 335 411 XP_013759182.1 peptidase S8 and S53 domain-containing protein [Thecamonas trahens ATCC 50062] diamond 234 87 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30940072 30940072 PRJNA874604_P_NODE_84494_length_246_cov_0.890173_g84142_i0 PRJNA874604 84494 246 0.890173 2.18982558 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 68.6 3.04e-11   NR XP_013759737.1 461836 g84142 i0 46.2 0.634146341463415 52 28 63.4 0 229 74 485 536 XP_013759737.1 ubiquitin carboxyl-terminal hydrolase [Thecamonas trahens ATCC 50062] diamond 156 68.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31097744 31097744 PRJNA874604_P_NODE_94035_length_243_cov_0.905882_g93683_i0 PRJNA874604 94035 243 0.905882 2.20129326 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 51.6 2.85e-5   NR XP_013757898.1 461836 g93683 i0 37 1 81 41 92.6 2 17 241 3106 3182 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 243 51.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31414089 31414089 PRJNA874604_P_NODE_56536_length_272_cov_1.512563_g56184_i0 PRJNA874604 56536 272 1.512563 4.11417136 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 93.6 5.39e-22   NR XP_013759960.1 461836 g56184 i0 57.5 0.882352941176471 80 28 81.6 1 50 271 1 80 XP_013759960.1 40S ribosomal protein S12 [Thecamonas trahens ATCC 50062] diamond 240 93.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31580409 31580409 PRJNA874604_P_NODE_27516_length_356_cov_1.413428_g27164_i0 PRJNA874604 27516 356 1.413428 5.03180368 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.8 7.63e-7   NR XP_013760817.1 461836 g27164 i0 35.7 3.05056179775281 126 70 96.9 2 3 347 327 452 XP_013760817.1 alpha-actinin A [Thecamonas trahens ATCC 50062] diamond 1086 57.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31698744 31698744 PRJNA874604_P_NODE_53237_length_278_cov_1.414634_g52885_i0 PRJNA874604 53237 278 1.414634 3.93268252 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.5 8.46e-6   NR XP_013753273.1 461836 g52885 i0 30.1 1.00359712230216 93 64 99.3 1 278 3 84 176 XP_013753273.1 uncharacterized protein AMSG_10686 [Thecamonas trahens ATCC 50062] diamond 279 53.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;