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contig_metadata

22 rows where bioproject = "PRJNA870096" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA870096 · 22 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3789217 3789217 PRJNA870096_S_NODE_50543_length_248_cov_1.170732_g48879_i0 PRJNA870096 50543 248 1.170732 2.90341536 archaeon 1906665 Archaea Archaea 74.3 2.86e-13   NR MDP2436795.1 1906665 g48879 i0 65.4 0.629032258064516 52 18 62.9 0 92 247 5 56 MDP2436795.1 isocitrate/isopropylmalate family dehydrogenase [archaeon] diamond 156 74.3 1 Archaea               archaeon
4678820 4678820 PRJNA870096_S_NODE_70084_length_209_cov_1.734940_g68420_i0 PRJNA870096 70084 209 1.73494 3.6260246 archaeon 1906665 Archaea Archaea 101 1.95e-25   NR MDP2437401.1 1906665 g68420 i0 76.5 1.96650717703349 68 16 97.6 0 5 208 50 117 MDP2437401.1 NFYB/HAP3 family transcription factor subunit [archaeon] diamond 411 101 1 Archaea               archaeon
6341252 6341252 PRJNA870096_S_NODE_46785_length_258_cov_1.967442_g45121_i0 PRJNA870096 46785 258 1.967442 5.07600036 archaeon 1906665 Archaea Archaea 105 1.72e-24   NR NCQ52386.1 1906665 g45121 i0 58.1 3.65116279069767 86 36 100 0 258 1 199 284 NCQ52386.1 elongation factor Tu [archaeon] diamond 942 105 1 Archaea               archaeon
7228376 7228376 PRJNA870096_S_NODE_49986_length_249_cov_1.742718_g48322_i0 PRJNA870096 49986 249 1.742718 4.33936782 archaeon 1906665 Archaea Archaea 129 8.05e-34   NR MDP2436427.1 1906665 g48322 i0 75.9 2 83 20 100 0 249 1 301 383 MDP2436427.1 DEAD/DEAH box helicase [archaeon] diamond 498 129 1 Archaea               archaeon
9777802 9777802 PRJNA870096_S_NODE_19448_length_411_cov_3.551630_g17792_i0 PRJNA870096 19448 411 3.55163 14.5971993 archaeon 1906665 Archaea Archaea 91.3 1.3e-20   NR NCQ52385.1 1906665 g17792 i0 58.9 0.532846715328467 73 30 53.3 0 219 1 18 90 NCQ52385.1 hypothetical protein [archaeon] diamond 219 91.3 1 Archaea               archaeon
26865622 26865622 PRJNA870096_S_NODE_40981_length_277_cov_2.256410_g39317_i0 PRJNA870096 40981 277 2.25641 6.2502557 archaeon 1906665 Archaea Archaea 83.6 7.32e-17   NR MDP2439181.1 1906665 g39317 i0 50.5 1.0072202166065 93 42 97.5 2 3 272 190 281 MDP2439181.1 hypothetical protein [archaeon] diamond 279 83.6 1 Archaea               archaeon
27750407 27750407 PRJNA870096_S_NODE_81424_length_194_cov_3.139073_g79760_i0 PRJNA870096 81424 194 3.139073 6.08980162 archaeon 1906665 Archaea Archaea 73.6 6.47e-14   NR RYH27822.1 1906665 g79760 i0 53.1 0.989690721649485 64 28 97.4 2 1 189 126 188 RYH27822.1 MAG: type 1 glutamine amidotransferase domain-containing protein [archaeon] diamond 192 73.6 1 Archaea               archaeon
28350045 28350045 PRJNA870096_S_NODE_42686_length_271_cov_1.842105_g41022_i0 PRJNA870096 42686 271 1.842105 4.99210455 Methanotrichaceae archaeon 2595067 Archaea Archaea 51.2 4.71e-5   NR MDD1757580.1 2595067 g41022 i0 38.9 0.797047970479705 72 42 79.7 2 249 34 61 130 MDD1757580.1 CBS domain-containing protein [Methanotrichaceae archaeon] diamond 216 51.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
28697553 28697553 PRJNA870096_S_NODE_24367_length_365_cov_3.298137_g22703_i0 PRJNA870096 24367 365 3.298137 12.03820005 archaeon 1906665 Archaea Archaea 120 3.89e-30   NR MDP2434421.1 1906665 g22703 i0 62.6 0.747945205479452 91 34 74.8 0 5 277 262 352 MDP2434421.1 class I SAM-dependent methyltransferase [archaeon] diamond 273 120 1 Archaea               archaeon
29139681 29139681 PRJNA870096_S_NODE_126709_length_158_cov_1.669565_g125045_i0 PRJNA870096 126709 158 1.669565 2.6379127000000002 archaeon 1906665 Archaea Archaea 96.7 5.76e-22   NR NCQ52386.1 1906665 g125045 i0 84.6 0.987341772151899 52 8 98.7 0 157 2 69 120 NCQ52386.1 elongation factor Tu [archaeon] diamond 156 96.7 1 Archaea               archaeon
29305285 29305285 PRJNA870096_S_NODE_115629_length_165_cov_1.729508_g113965_i0 PRJNA870096 115629 165 1.729508 2.8536882 root 1 Root_unresolved Root_unresolved 51.2 8.62e-6   NR MDP2439874.1 1906665 g113965 i0 43.5 2.54545454545455 46 26 83.6 0 2 139 91 136 MDP2439874.1 hypothetical protein [archaeon] diamond 420 51.6 0.992248062015504 Archaea               archaeon
29423368 29423368 PRJNA870096_S_NODE_35249_length_300_cov_3.330739_g33585_i0 PRJNA870096 35249 300 3.330739 9.992217 archaeon 1906665 Archaea Archaea 98.2 3.8e-22   NR MDP2434961.1 1906665 g33585 i0 48.4 3.9 93 48 93 0 3 281 215 307 MDP2434961.1 pirin family protein [archaeon] diamond 1170 98.2 1 Archaea               archaeon
29486492 29486492 PRJNA870096_S_NODE_94530_length_181_cov_1.753623_g92866_i0 PRJNA870096 94530 181 1.753623 3.17405763 archaeon 1906665 Archaea Archaea 74.3 1.47e-14   NR MDP2434407.1 1906665 g92866 i0 62.1 0.961325966850829 58 21 96.1 1 3 176 118 174 MDP2434407.1 DnaJ C-terminal domain-containing protein [archaeon] diamond 174 74.3 1 Archaea               archaeon
29707312 29707312 PRJNA870096_S_NODE_50070_length_249_cov_1.398058_g48406_i0 PRJNA870096 50070 249 1.398058 3.48116442 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 140 2.84e-39   NR MFH1447465.1 2250274 g48406 i0 79.7 15.433734939759 79 16 95.2 0 9 245 150 228 MFH1447465.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Candidatus Micrarchaeota archaeon] diamond 3843 140 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
30340096 30340096 PRJNA870096_S_NODE_79732_length_196_cov_2.313725_g78068_i0 PRJNA870096 79732 196 2.313725 4.534901 archaeon 1906665 Archaea Archaea 43.1 0.0151   NR MDP2435572.1 1906665 g78068 i0 52.8 0.979591836734694 36 17 55.1 0 29 136 209 244 MDP2435572.1 filamin/ABP280 repeat domain-containing protein [archaeon] diamond 192 43.1 1 Archaea               archaeon
31160677 31160677 PRJNA870096_S_NODE_82315_length_193_cov_4.966667_g80651_i0 PRJNA870096 82315 193 4.966667 9.58566731 archaeon 1906665 Archaea Archaea 106 4.92e-27   NR MDP2435966.1 1906665 g80651 i0 73.4 2.95336787564767 64 17 99.5 0 193 2 97 160 MDP2435966.1 nucleoside-diphosphate kinase [archaeon] diamond 570 106 1 Archaea               archaeon
31192249 31192249 PRJNA870096_S_NODE_17435_length_436_cov_3.173028_g15787_i0 PRJNA870096 17435 436 3.173028 13.83440208 archaeon 1906665 Archaea Archaea 86.3 1.1e-17   NR MDP2436265.1 1906665 g15787 i0 48.2 0.571100917431193 83 43 57.1 0 32 280 100 182 MDP2436265.1 universal stress protein [archaeon] diamond 249 86.3 1 Archaea               archaeon
31509074 31509074 PRJNA870096_S_NODE_80196_length_196_cov_1.254902_g78532_i0 PRJNA870096 80196 196 1.254902 2.45960792 archaeon 1906665 Archaea Archaea 97.4 7.249999999999999e-24   NR MDP2435772.1 1906665 g78532 i0 69.2 0.994897959183674 65 20 99.5 0 2 196 38 102 MDP2435772.1 hypothetical protein [archaeon] diamond 195 97.4 1 Archaea               archaeon
31572337 31572337 PRJNA870096_S_NODE_25476_length_357_cov_2.175159_g23812_i0 PRJNA870096 25476 357 2.175159 7.76531763 Nitrososphaerales archaeon 2268197 Archaea Archaea 104 3.259999999999999e-23   NR MEE9586260.1 2268197 g23812 i0 46.2 0.873949579831933 104 55 87.4 1 348 37 488 590 MEE9586260.1 phosphoenolpyruvate carboxykinase (GTP) [Nitrososphaerales archaeon] diamond 312 104 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
31928166 31928166 PRJNA870096_S_NODE_69457_length_210_cov_1.622754_g67793_i0 PRJNA870096 69457 210 1.622754 3.4077834 root 1 Root_unresolved Root_unresolved 99.4 2.5699999999999998e-23   NR MDP2435588.1 1906665 g67793 i0 70.6 8.88571428571429 68 20 97.1 0 204 1 23 90 MDP2435588.1 glutathione binding-like protein [archaeon] diamond 1866 99.4 1 Archaea               archaeon
32015049 32015049 PRJNA870096_S_NODE_68898_length_211_cov_1.428571_g67234_i0 PRJNA870096 68898 211 1.428571 3.01428481 archaeon 1906665 Archaea Archaea 47.4 5.66e-4   NR MDP2439412.1 1906665 g67234 i0 35.5 2.34597156398104 62 40 88.2 0 192 7 195 256 MDP2439412.1 hypothetical protein [archaeon] diamond 495 47.4 1 Archaea               archaeon
32553240 32553240 PRJNA870096_S_NODE_53419_length_240_cov_3.502538_g51755_i0 PRJNA870096 53419 240 3.502538 8.4060912 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 79 4.16e-15   NR UCD07325.1 3121606 g51755 i0 52.9 1.7 68 32 85 0 240 37 287 354 UCD07325.1 MAG: polyprenyl synthetase family protein [Candidatus Aenigmatarchaeota archaeon] diamond 408 79 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;