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contig_metadata

11 rows where bioproject = "PRJNA870096" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA870096 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5065413 5065413 PRJNA870096_S_NODE_66684_length_214_cov_13.508772_g65020_i0 PRJNA870096 66684 214 13.508772 28.90877208 Protopolystoma xenopodis 117903 Platyhelminthes Platyhelminthes 128 1.07e-36   NR VEL07836.1 117903 g65020 i0 88.1 5.53738317757009 67 8 93.9 0 3 203 23 89 VEL07836.1 unnamed protein product [Protopolystoma xenopodis] diamond 1185 128 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Protopolystoma Protopolystoma xenopodis
8502806 8502806 PRJNA870096_S_NODE_20907_length_396_cov_9.473088_g19247_i0 PRJNA870096 20907 396 9.473088 37.51342848 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 183 1.29e-41   NTclustered gi|62199298|gb|AY967668.1| 79327 g19247 i0 85.714 8.07575757575758 175 23 44 2 155 328 642 469 Schmidtea mediterranea clone NBE.7.02A mRNA sequence blastn 3198 183 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
14877362 14877362 PRJNA870096_S_NODE_113312_length_167_cov_1.161290_g111648_i0 PRJNA870096 113312 167 1.16129 1.9393543 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 292 7.58e-75   NTclustered gi|28273263|gb|AY157151.1| 52061 g111648 i0 98.204 1 167 3 100 0 1 167 2213 2379 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 167 292 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
19976676 19976676 PRJNA870096_S_NODE_41276_length_276_cov_1.952790_g39612_i0 PRJNA870096 41276 276 1.95279 5.3897004 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 130 1.15e-33   NR XP_024347049.1 6210 g39612 i0 87.1 25.8913043478261 70 9 76.1 0 276 67 230 299 XP_024347049.1 Serine/threonine-protein phosphatase PP1-beta catalytic subunit [Echinococcus granulosus] diamond 7146 130 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
27821586 27821586 PRJNA870096_S_NODE_124064_length_160_cov_1.230769_g122400_i0 PRJNA870096 124064 160 1.230769 1.9692304 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82.4 8.8e-17   NR VDD76371.1 53468 g122400 i0 69.2 3.88125 52 16 97.5 0 156 1 301 352 VDD76371.1 unnamed protein product [Mesocestoides corti] diamond 621 83.2 0.990384615384615 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
29202716 29202716 PRJNA870096_S_NODE_94929_length_181_cov_1.217391_g93265_i0 PRJNA870096 94929 181 1.217391 2.20347771 Taenia asiatica 60517 Platyhelminthes Platyhelminthes 44.7 0.00347   NR VDK20279.1 60517 g93265 i0 58.1 1.02762430939227 31 13 51.4 0 106 14 661 691 VDK20279.1 unnamed protein product [Taenia asiatica] diamond 186 44.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia asiatica
29526491 29526491 PRJNA870096_S_NODE_89710_length_186_cov_1.041958_g88046_i0 PRJNA870096 89710 186 1.041958 1.93804188 Metazoa 33208 Platyhelminthes Platyhelminthes 60.5 8.14e-10   NR PAA92964.1 282301 g88046 i0 63.5 6.79032258064516 52 19 83.9 0 30 185 21 72 PAA92964.1 hypothetical protein BOX15_Mlig002061g4, partial [Macrostomum lignano] diamond 1263 60.8 0.995065789473684 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
29620660 29620660 PRJNA870096_S_NODE_13150_length_506_cov_21.017279_g11523_i0 PRJNA870096 13150 506 21.017279 106.34743174 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 157 9.89e-46   NR AAW25011.1 6182 g11523 i0 55.8 10.3458498023715 147 63 87.2 2 495 55 15 159 AAW25011.1 SJCHGC00639 protein [Schistosoma japonicum] diamond 5235 157 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31833136 31833136 PRJNA870096_S_NODE_88697_length_187_cov_1.000000_g87033_i0 PRJNA870096 88697 187 1 1.87 Opisthokonta 33154 Platyhelminthes Platyhelminthes 65.9 3.85e-11   NR VDN15512.1 60516 g87033 i0 52.5 8.58288770053476 59 28 94.7 0 184 8 120 178 VDN15512.1 unnamed protein product, partial [Dibothriocephalus latus] diamond 1605 65.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Dibothriocephalus Dibothriocephalus latus
31920137 31920137 PRJNA870096_S_NODE_139837_length_152_cov_1.045872_g138173_i0 PRJNA870096 139837 152 1.045872 1.58972544 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 40.8 0.0499   NR PAA86001.1 282301 g138173 i0 56.3 0.631578947368421 32 14 63.2 0 133 38 206 237 PAA86001.1 hypothetical protein BOX15_Mlig023296g1, partial [Macrostomum lignano] diamond 96 40.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
32394823 32394823 PRJNA870096_S_NODE_120739_length_162_cov_1.210084_g119075_i0 PRJNA870096 120739 162 1.210084 1.96033608 Protopolystoma xenopodis 117903 Platyhelminthes Platyhelminthes 89.4 1.35e-19   NR VEL27917.1 117903 g119075 i0 76.5 0.944444444444444 51 12 94.4 0 154 2 129 179 VEL27917.1 unnamed protein product, partial [Protopolystoma xenopodis] diamond 153 89.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Protopolystoma Protopolystoma xenopodis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;