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contig_metadata

35 rows where bioproject = "PRJNA870096" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 35 ✖

tax_clade 1

bioproject 1

  • PRJNA870096 · 35 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2124714 2124714 PRJNA870096_S_NODE_110342_length_169_cov_1.142857_g108678_i0 PRJNA870096 110342 169 1.142857 1.93142833 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 97.8 2.94e-22   NR TMW66756.1 41045 g108678 i0 78.6 13.8639053254438 56 12 99.4 0 169 2 357 412 TMW66756.1 hypothetical protein Poli38472_014068 [Pythium oligandrum] diamond 2343 97.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
2125094 2125094 PRJNA870096_S_NODE_14062_length_488_cov_13.723596_g12426_i0 PRJNA870096 14062 488 13.723596 66.97114848 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 140 5.53e-37   NR DBA03690.1 4803 g12426 i0 59.3 0.756147540983607 123 47 75.6 1 393 25 220 339 DBA03690.1 TPA: hypothetical protein N0F65_004107 [Lagenidium giganteum] diamond 369 140 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
2125198 2125198 PRJNA870096_S_NODE_19502_length_410_cov_15.994550_g17846_i0 PRJNA870096 19502 410 15.99455 65.577655 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 140 1.8e-39   NR XP_024579303.1 4781 g17846 i0 67.6 1.46341463414634 102 33 74.6 0 369 64 62 163 XP_024579303.1 60s ribosomal protein l44 [Plasmopara halstedii] diamond 600 140 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
5953754 5953754 PRJNA870096_S_NODE_6905_length_711_cov_8.851796_g5546_i0 PRJNA870096 6905 711 8.851796 62.93626956 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 154 1.89e-32   NTclustered gi|2795040539|ref|XM_067944827.1| 4785 g5546 i0 84.81 23.7819971870605 158 18 22 4 124 278 851 1005 Phytophthora cinnamomi glyceraldehyde-3-phosphate dehydrogenase (IUM83_19763), partial mRNA blastn 16909 154 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
18701459 18701459 PRJNA870096_S_NODE_37855_length_289_cov_2.394309_g36191_i0 PRJNA870096 37855 289 2.394309 6.91955301 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 142 4.1e-37   NR DBA02451.1 4803 g36191 i0 81.3 34.0795847750865 96 18 99.7 0 289 2 92 187 DBA02451.1 TPA: hypothetical protein N0F65_008665 [Lagenidium giganteum] diamond 9849 142 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
21639436 21639436 PRJNA870096_S_NODE_76157_length_201_cov_1.189873_g74493_i0 PRJNA870096 76157 201 1.189873 2.39164473 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 72.8 5e-13   NR KAF1315488.1 82926 g74493 i0 51.5 2 68 30 97 1 6 200 314 381 KAF1315488.1 Ribosome biogenesis protein wdr12, partial [Globisporangium splendens] diamond 402 72.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
26738221 26738221 PRJNA870096_S_NODE_115501_length_165_cov_1.967213_g113837_i0 PRJNA870096 115501 165 1.967213 3.24590145 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 51.2 1.29e-5   NR GLD94979.1 114742 g113837 i0 46.3 1.96363636363636 54 29 98.2 0 163 2 512 565 GLD94979.1 hypothetical protein PINS_up003604 [Pythium insidiosum] diamond 324 51.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
27379586 27379586 PRJNA870096_S_NODE_63463_length_220_cov_1.355932_g61799_i0 PRJNA870096 63463 220 1.355932 2.9830504 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.29e-4   NR XP_008610367.1 1156394 g61799 i0 40.4 2.16818181818182 52 31 70.9 0 63 218 369 420 XP_008610367.1 hypothetical protein SDRG_06366 [Saprolegnia diclina VS20] diamond 477 49.7 0.991951710261569 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
27695387 27695387 PRJNA870096_S_NODE_61904_length_223_cov_1.066667_g60240_i0 PRJNA870096 61904 223 1.066667 2.37866741 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 50.8 3.52e-5   NR CAH0519892.1 622444 g60240 i0 38 2.55605381165919 71 41 94.2 2 3 212 144 212 CAH0519892.1 unnamed protein product [Peronospora belbahrii] diamond 570 51.2 0.9921875 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
28294958 28294958 PRJNA870096_S_NODE_40366_length_279_cov_3.906780_g38702_i0 PRJNA870096 40366 279 3.90678 10.8999162 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 77.4 3.7e-14   NR CCI46083.1 65357 g38702 i0 43.3 25.247311827957 90 51 96.8 0 274 5 937 1026 CCI46083.1 unnamed protein product [Albugo candida] diamond 7044 77.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
28357980 28357980 PRJNA870096_S_NODE_119366_length_163_cov_1.200000_g117702_i0 PRJNA870096 119366 163 1.2 1.956 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 70.9 2.76e-13   NR KAF1782336.1 29920 g117702 i0 64.8 9.93865030674847 54 19 99.4 0 1 162 126 179 KAF1782336.1 Longin-like domain [Phytophthora cactorum] diamond 1620 71.6 0.990223463687151 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
28484504 28484504 PRJNA870096_S_NODE_39106_length_284_cov_2.390041_g37442_i0 PRJNA870096 39106 284 2.390041 6.78771644 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 70.9 4.15e-12   NR KAF1321134.1 82926 g37442 i0 37.1 1.95422535211268 97 55 96.1 3 3 275 173 269 KAF1321134.1 hypothetical protein FI667_g12080, partial [Globisporangium splendens] diamond 555 70.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28507984 28507984 PRJNA870096_S_NODE_117787_length_164_cov_1.190083_g116123_i0 PRJNA870096 117787 164 1.190083 1.95173612 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 52.4 5.07e-6   NR KAF0699325.1 120398 g116123 i0 50 2.79878048780488 50 25 91.5 0 162 13 205 254 KAF0699325.1 hypothetical protein As57867_010076 [Aphanomyces stellatus] diamond 459 52.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
28737076 28737076 PRJNA870096_S_NODE_37107_length_292_cov_2.538153_g35443_i0 PRJNA870096 37107 292 2.538153 7.41140676 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00966   NR DAZ97832.1 4803 g35443 i0 59.4 1.72602739726027 32 13 32.9 0 134 229 308 339 DAZ97832.1 TPA: hypothetical protein N0F65_002502 [Lagenidium giganteum] diamond 504 45.4 0.993392070484582 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28768536 28768536 PRJNA870096_S_NODE_22767_length_378_cov_4.889552_g21106_i0 PRJNA870096 22767 378 4.889552 18.48250656 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0217   NR KAF1333323.1 82926 g21106 i0 30 1.42857142857143 90 56 71.4 2 60 329 83 165 KAF1333323.1 Gtp-binding protein parf, partial [Globisporangium splendens] diamond 540 44.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28989900 28989900 PRJNA870096_S_NODE_28068_length_339_cov_1.844595_g26404_i0 PRJNA870096 28068 339 1.844595 6.25317705 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 50.8 1.02e-4   NR XP_012198388.1 695850 g26404 i0 29.7 1.79646017699115 101 64 88.5 2 2 301 120 214 XP_012198388.1 hypothetical protein SPRG_04585 [Saprolegnia parasitica CBS 223.65] diamond 609 50.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
29084466 29084466 PRJNA870096_S_NODE_34828_length_302_cov_3.528958_g33164_i0 PRJNA870096 34828 302 3.528958 10.65745316 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 50.8 2.12e-5   NR TMW68648.1 41045 g33164 i0 32.6 1.86754966887417 95 61 91.4 1 295 20 32 126 TMW68648.1 hypothetical protein Poli38472_006116 [Pythium oligandrum] diamond 564 50.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29715543 29715543 PRJNA870096_S_NODE_111810_length_168_cov_1.152000_g110146_i0 PRJNA870096 111810 168 1.152 1.93536 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 51.2 1.36e-5   NR XP_067814356.1 4779 g110146 i0 60 2.41071428571429 45 17 80.4 1 3 137 947 990 XP_067814356.1 hypothetical protein CCR75_001697 [Bremia lactucae] diamond 405 51.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
29739043 29739043 PRJNA870096_S_NODE_133390_length_154_cov_3.027027_g131726_i0 PRJNA870096 133390 154 3.027027 4.66162158 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 64.7 1.28e-10   NR KAF0691625.1 120398 g131726 i0 65.2 0.896103896103896 46 15 89.6 1 152 15 223 267 KAF0691625.1 hypothetical protein As57867_017136 [Aphanomyces stellatus] diamond 138 64.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
30000221 30000221 PRJNA870096_S_NODE_122451_length_161_cov_1.220339_g120787_i0 PRJNA870096 122451 161 1.220339 1.96474579 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 54.3 1e-6   NR XP_012209304.1 695850 g120787 i0 46.2 3.18633540372671 52 22 96.9 1 1 156 309 354 XP_012209304.1 hypothetical protein SPRG_14581 [Saprolegnia parasitica CBS 223.65] diamond 513 54.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
30284841 30284841 PRJNA870096_S_NODE_18512_length_422_cov_3.786280_g16859_i0 PRJNA870096 18512 422 3.78628 15.9781016 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 71.2 2.58e-11   NR KAE9276047.1 53985 g16859 i0 51.3 1.70616113744076 80 38 56.9 1 414 175 202 280 KAE9276047.1 hypothetical protein PF008_g29188 [Phytophthora fragariae] diamond 720 71.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
30371580 30371580 PRJNA870096_S_NODE_31772_length_318_cov_1.396364_g30108_i0 PRJNA870096 31772 318 1.396364 4.44043752 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 70.1 2.17e-11   NR OQR96029.1 74557 g30108 i0 46.8 0.726415094339623 77 40 71.7 1 270 43 149 225 OQR96029.1 hypothetical protein THRCLA_07400 [Thraustotheca clavata] diamond 231 70.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30411164 30411164 PRJNA870096_S_NODE_44913_length_264_cov_1.592760_g43249_i0 PRJNA870096 44913 264 1.59276 4.2048864 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 116 2.55e-31   NR XP_012206816.1 695850 g43249 i0 59.1 2 88 36 100 0 264 1 43 130 XP_012206816.1 hypothetical protein SPRG_12707 [Saprolegnia parasitica CBS 223.65] diamond 528 117 0.991452991452991 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
31074417 31074417 PRJNA870096_S_NODE_19875_length_406_cov_13.933884_g18219_i0 PRJNA870096 19875 406 13.933884 56.57156904 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.6 1.48e-6   NR XP_067817714.1 4779 g18219 i0 40.9 7.43349753694581 66 38 48 1 177 371 153 218 XP_067817714.1 hypothetical protein CCR75_009553 [Bremia lactucae] diamond 3018 57 0.992982456140351 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
31263998 31263998 PRJNA870096_S_NODE_81535_length_194_cov_2.112583_g79871_i0 PRJNA870096 81535 194 2.112583 4.09841102 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0143   NR DBA01737.1 4803 g79871 i0 34.4 4.02061855670103 64 42 99 0 194 3 459 522 DBA01737.1 TPA: hypothetical protein N0F65_010147, partial [Lagenidium giganteum] diamond 780 43.5 0.990804597701149 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31382496 31382496 PRJNA870096_S_NODE_31656_length_318_cov_3.210909_g29992_i0 PRJNA870096 31656 318 3.210909 10.21069062 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 82.8 2.52e-16   NR KAF1327750.1 82926 g29992 i0 45.1 4.88679245283019 102 56 96.2 0 311 6 198 299 KAF1327750.1 Atp synthase f1, gamma subunit, partial [Globisporangium splendens] diamond 1554 82.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
31833133 31833133 PRJNA870096_S_NODE_39597_length_282_cov_3.012552_g37933_i0 PRJNA870096 39597 282 3.012552 8.49539664 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 77.4 1.06e-14   NR KAG3085991.1 29920 g37933 i0 57.1 6.78723404255319 70 30 74.5 0 268 59 194 263 KAG3085991.1 hypothetical protein PC122_g9434 [Phytophthora cactorum] diamond 1914 77.8 0.994858611825193 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
32173455 32173455 PRJNA870096_S_NODE_35398_length_300_cov_1.385214_g33734_i0 PRJNA870096 35398 300 1.385214 4.155642 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 45.8 9.87e-4   NR KAH9129957.1 100861 g33734 i0 32.6 0.86 86 53 86 3 264 7 16 96 KAH9129957.1 hypothetical protein AeMF1_000016 [Aphanomyces euteiches] diamond 258 45.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
32553233 32553233 PRJNA870096_S_NODE_127259_length_158_cov_1.252174_g125595_i0 PRJNA870096 127259 158 1.252174 1.97843492 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0118   NR XP_012205852.1 695850 g125595 i0 44.2 5.43037974683544 52 28 96.8 1 153 1 468 519 XP_012205852.1 hypothetical protein SPRG_11453 [Saprolegnia parasitica CBS 223.65] diamond 858 42.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
32584690 32584690 PRJNA870096_S_NODE_46939_length_258_cov_1.116279_g45275_i0 PRJNA870096 46939 258 1.116279 2.87999982 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0128   NR KAF1318398.1 82926 g45275 i0 39.8 2.66279069767442 83 47 94.2 3 15 257 647 728 KAF1318398.1 Snf2 domain containing protein, partial [Globisporangium splendens] diamond 687 44.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
32584695 32584695 PRJNA870096_S_NODE_99039_length_177_cov_2.328358_g97375_i0 PRJNA870096 99039 177 2.328358 4.12119366 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 65.1 3.53e-11   NR KAG9405665.1 112091 g97375 i0 66 0.796610169491525 47 16 79.7 0 172 32 124 170 KAG9405665.1 hypothetical protein AC1031_003573 [Aphanomyces cochlioides] diamond 141 65.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
32718544 32718544 PRJNA870096_S_NODE_103560_length_174_cov_1.099237_g101896_i0 PRJNA870096 103560 174 1.099237 1.91267238 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 55.1 5.38e-8   NR KAE8927532.1 53985 g101896 i0 78.8 6.82758620689655 33 7 56.9 0 5 103 65 97 KAE8927532.1 hypothetical protein PF009_g22304 [Phytophthora fragariae] diamond 1188 55.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
32781308 32781308 PRJNA870096_S_NODE_21580_length_390_cov_1.469741_g19920_i0 PRJNA870096 21580 390 1.469741 5.7319899 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 108 2.4e-24   NR TMW65935.1 41045 g19920 i0 54.6 9.03076923076923 97 44 74.6 0 31 321 297 393 TMW65935.1 hypothetical protein Poli38472_003700 [Pythium oligandrum] diamond 3522 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
32812879 32812879 PRJNA870096_S_NODE_18020_length_428_cov_6.116883_g16369_i0 PRJNA870096 18020 428 6.116883 26.18025924 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.4 1.02e-4   NR RLN52449.1 325452 g16369 i0 36 2.48130841121495 100 50 60.3 2 150 407 284 383 RLN52449.1 hypothetical protein BBJ29_008377 [Phytophthora kernoviae] diamond 1062 52.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
32867799 32867799 PRJNA870096_S_NODE_20380_length_401_cov_5.569832_g18722_i0 PRJNA870096 20380 401 5.569832 22.33502632 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 95.5 4.35e-20   NR OQS00514.1 1202772 g18722 i0 54.7 3.06733167082294 137 57 98.8 1 396 1 268 404 OQS00514.1 histone-binding protein RBBP4 [Achlya hypogyna] diamond 1230 95.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;