RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA870096" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA870096 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28034485 28034485 PRJNA870096_S_NODE_31245_length_320_cov_4.787004_g29581_i0 PRJNA870096 31245 320 4.787004 15.3184128 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 45.8 0.00316   NR MCM8804011.1 2035772 g29581 i0 30.3 0.61875 66 46 61.9 0 240 43 26 91 MCM8804011.1 30S ribosomal protein S7 [Candidatus Omnitrophota bacterium] diamond 198 45.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32521614 32521614 PRJNA870096_S_NODE_73979_length_204_cov_0.894410_g72315_i0 PRJNA870096 73979 204 0.89441 1.8245964 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.5 3.64e-6   NR MEW6238568.1 2035772 g72315 i0 61.9 3.80882352941176 42 15 61.8 1 4 129 33 73 MEW6238568.1 putative Ig domain-containing protein [Candidatus Omnitrophota bacterium] diamond 777 53.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;