contig_metadata
5 rows where bioproject = "PRJNA870096", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7227639 | 7227639 | PRJNA870096_S_NODE_11686_length_539_cov_2.895161_g10089_i0 | PRJNA870096 | 11686 | 539 | 2.895161 | 15.60491779 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 182 | 1.0299999999999999e-52 | NR | MBI3621453.1 | 2026887 | g10089 | i0 | 57.4 | 12.5844155844156 | 155 | 66 | 86.3 | 0 | 53 | 517 | 60 | 214 | MBI3621453.1 F0F1 ATP synthase subunit alpha [Nitrospirota bacterium] | diamond | 6783 | 183 | 0.994535519125683 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 28831666 | 28831666 | PRJNA870096_S_NODE_97288_length_179_cov_1.227941_g95624_i0 | PRJNA870096 | 97288 | 179 | 1.227941 | 2.19801439 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.3 | 3.86e-10 | NR | OLB03108.1 | 1805275 | g95624 | i0 | 55.1 | 6.30167597765363 | 49 | 22 | 82.1 | 0 | 178 | 32 | 159 | 207 | OLB03108.1 MAG: hypothetical protein AUH21_04260 [Nitrospirae bacterium 13_2_20CM_62_7] | diamond | 1128 | 64.3 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirae bacterium 13_2_20CM_62_7 | ||||||
| 29486489 | 29486489 | PRJNA870096_S_NODE_70890_length_208_cov_1.454545_g69226_i0 | PRJNA870096 | 70890 | 208 | 1.454545 | 3.0254536 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 105 | 2.5999999999999996e-24 | NR | MCG3773275.1 | 70125 | g69226 | i0 | 68.1 | 4.97596153846154 | 69 | 22 | 99.5 | 0 | 207 | 1 | 383 | 451 | MCG3773275.1 ATP-dependent RNA helicase DbpA [Nitrospira sp.] | diamond | 1035 | 105 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29620664 | 29620664 | PRJNA870096_S_NODE_73530_length_204_cov_1.788820_g71866_i0 | PRJNA870096 | 73530 | 204 | 1.78882 | 3.6491928 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 109 | 1.65e-27 | NR | MCA9472613.1 | 70125 | g71866 | i0 | 78.8 | 17.6470588235294 | 66 | 14 | 97.1 | 0 | 6 | 203 | 188 | 253 | MCA9472613.1 fumarylacetoacetate hydrolase family protein [Nitrospira sp.] | diamond | 3600 | 110 | 0.990909090909091 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30750368 | 30750368 | PRJNA870096_S_NODE_17294_length_438_cov_4.486076_g15647_i0 | PRJNA870096 | 17294 | 438 | 4.486076 | 19.64901288 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 68.2 | 4.07e-10 | NR | MBI5746379.1 | 2026887 | g15647 | i0 | 39.5 | 0.815068493150685 | 119 | 67 | 80.1 | 3 | 435 | 85 | 520 | 635 | MBI5746379.1 molecular chaperone DnaK [Nitrospirota bacterium] | diamond | 357 | 68.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;