RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA870096", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA870096 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8502874 8502874 PRJNA870096_S_NODE_27147_length_345_cov_6.284768_g25483_i0 PRJNA870096 27147 345 6.284768 21.6824496 Rozella allomycis CSF55 988480 Fungi Fungi 174 1.44e-50   NR EPZ31166.1 988480 g25483 i0 71.6 5.04347826086957 116 30 98.3 1 344 6 269 384 EPZ31166.1 60S ribosomal protein L3 [Rozella allomycis CSF55] diamond 1740 174 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29139690 29139690 PRJNA870096_S_NODE_51549_length_245_cov_1.861386_g49885_i0 PRJNA870096 51549 245 1.861386 4.5603957 Rozella allomycis CSF55 988480 Fungi Fungi 126 1.48e-35   NR EPZ34633.1 988480 g49885 i0 78.7 0.918367346938776 75 16 91.8 0 227 3 24 98 EPZ34633.1 Xylose isomerase-like, TIM barrel domain-containing protein [Rozella allomycis CSF55] diamond 225 126 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;