RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA870096", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA870096 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5954003 5954003 PRJNA870096_S_NODE_89245_length_186_cov_1.678322_g87581_i0 PRJNA870096 89245 186 1.678322 3.12167892 Fungi 4751 Fungi Fungi 94 3.9300000000000005e-21   NR KAI9141123.1 1500003 g87581 i0 72.1 1.95161290322581 61 17 98.4 0 3 185 256 316 KAI9141123.1 ATPase GET3 [Paraphysoderma sedebokerense] diamond 363 94 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
18700950 18700950 PRJNA870096_S_NODE_12375_length_524_cov_2.521830_g10759_i0 PRJNA870096 12375 524 2.52183 13.2143892 Blastocladiella britannica 64508 Fungi Fungi 271 2.3299999999999997e-88   NR KAI9218401.1 64508 g10759 i0 77.3 21.0114503816794 176 38 99.6 2 1 522 64 239 KAI9218401.1 60S ribosomal protein L2 [Blastocladiella britannica] diamond 11010 271 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
26841984 26841984 PRJNA870096_S_NODE_97781_length_178_cov_3.200000_g96117_i0 PRJNA870096 97781 178 3.2 5.696 Opisthokonta 33154 Fungi Fungi 49.3 7.3e-5   NR KAI9217773.1 64508 g96117 i0 50 2.8314606741573 56 27 94.4 1 176 9 80 134 KAI9217773.1 PCI domain-containing protein [Blastocladiella britannica] diamond 504 49.7 0.991951710261569 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
28286716 28286716 PRJNA870096_S_NODE_58146_length_230_cov_1.796791_g56482_i0 PRJNA870096 58146 230 1.796791 4.1326193 Blastocladiella britannica 64508 Fungi Fungi 46.6 0.00132   NR KAI9217468.1 64508 g56482 i0 50 0.808695652173913 62 28 80.9 1 27 212 44 102 KAI9217468.1 hypothetical protein BC828DRAFT_391095 [Blastocladiella britannica] diamond 186 46.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
28381639 28381639 PRJNA870096_S_NODE_98386_length_178_cov_1.296296_g96722_i0 PRJNA870096 98386 178 1.296296 2.30740688 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 79.7 1.45e-15   NR KNE54225.1 578462 g96722 i0 60.3 0.97752808988764 58 23 97.8 0 174 1 662 719 KNE54225.1 hypothetical protein AMAG_00216 [Allomyces macrogynus ATCC 38327] diamond 174 79.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
28444954 28444954 PRJNA870096_S_NODE_12446_length_522_cov_9.567850_g10828_i0 PRJNA870096 12446 522 9.56785 49.944177 Coelomomyces lativittatus 945690 Fungi Fungi 79.3 6.3e-15   NR KAJ1507245.1 945690 g10828 i0 33.8 0.885057471264368 154 90 81.6 3 464 39 12 165 KAJ1507245.1 hypothetical protein HMI56_000196 [Coelomomyces lativittatus] diamond 462 79.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;